RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 E7EWF7 191 aa17.9■□□□□ 0.46
NUP50-219ENST00000497960 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
NUP50-219ENST00000497960 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
NUP50-219ENST00000497960 PGK1P00558 417 aa17.9■□□□□ 0.46
NUP50-219ENST00000497960 ATN1P54259 1190 aaPredicted RBP17.9■□□□□ 0.46
NUP50-219ENST00000497960 SART3Q15020 963 aaKnown RBP17.9■□□□□ 0.46
NUP50-219ENST00000497960 SEC23AQ15436 765 aa17.9■□□□□ 0.46
NUP50-219ENST00000497960 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
NUP50-219ENST00000497960 NFIBO00712 420 aa17.89■□□□□ 0.45
NUP50-219ENST00000497960 BAATQ14032 418 aaPredicted RBP17.89■□□□□ 0.45
NUP50-219ENST00000497960 CDC37Q16543 378 aaPredicted RBP17.89■□□□□ 0.45
NUP50-219ENST00000497960 CPVLQ9H3G5 476 aa17.89■□□□□ 0.45
NUP50-219ENST00000497960 ADD3Q9UEY8 706 aaKnown RBP17.89■□□□□ 0.45
NUP50-219ENST00000497960 ALPK3Q96L96 1907 aa17.89■□□□□ 0.45
NUP50-219ENST00000497960 DUSP11O75319 330 aaKnown RBP17.88■□□□□ 0.45
NUP50-219ENST00000497960 ADCYAP1R1P41586 468 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 CCDC144BQ3MJ40 725 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 RNF207Q6ZRF8 634 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 ADGRF4Q8IZF3 695 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 CLEC4DQ8WXI8 215 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 LENG1Q96BZ8 264 aaPredicted RBP17.88■□□□□ 0.45
NUP50-219ENST00000497960 LSG1Q9H089 658 aaKnown RBP17.88■□□□□ 0.45
NUP50-219ENST00000497960 SPC25Q9HBM1 224 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 PHF24Q9UPV7 400 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 MCM3APO60318 1980 aa17.88■□□□□ 0.45
NUP50-219ENST00000497960 SYN1P17600 705 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 RTP1P59025 263 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 WTAPQ15007 396 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 USH1GQ495M9 461 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 SLC39A5Q6ZMH5 540 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 STOX1Q6ZVD7 989 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 NOL8Q76FK4 1167 aaKnown RBP17.87■□□□□ 0.45
NUP50-219ENST00000497960 FERMT2Q96AC1 680 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 VAT1LQ9HCJ6 419 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 RBM27Q9P2N5 1060 aaKnown RBP17.87■□□□□ 0.45
NUP50-219ENST00000497960 TAF6LQ9Y6J9 622 aa17.87■□□□□ 0.45
NUP50-219ENST00000497960 ADAMTS4O75173 837 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 CALML3P27482 149 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 MPHOSPH6Q99547 160 aaKnown RBP17.86■□□□□ 0.45
NUP50-219ENST00000497960 TSEN34Q9BSV6 310 aaKnown RBP17.86■□□□□ 0.45
NUP50-219ENST00000497960 KATNBL1Q9H079 304 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 PRKAG2Q9UGJ0 569 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 ATP11BQ9Y2G3 1177 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 SYNRGQ9UMZ2 1314 aa17.86■□□□□ 0.45
NUP50-219ENST00000497960 LOC102724159A0A0B4J2E5 919 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 KLRF2D3W0D1 207 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 ASTN1O14525 1302 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 ABCB11O95342 1321 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 C6orf222P0C671 652 aaPredicted RBP17.85■□□□□ 0.45
NUP50-219ENST00000497960 ALDH5A1P51649 535 aaPredicted RBP17.85■□□□□ 0.45
NUP50-219ENST00000497960 RPS6P62753 249 aaKnown RBP17.85■□□□□ 0.45
NUP50-219ENST00000497960 TNFAIP2Q03169 654 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 PWP2Q15269 919 aaKnown RBP17.85■□□□□ 0.45
NUP50-219ENST00000497960 QRICH1Q2TAL8 776 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 SLC30A10Q6XR72 485 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 FBXO11Q86XK2 927 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 MB21D2Q8IYB1 491 aaPredicted RBP17.85■□□□□ 0.45
NUP50-219ENST00000497960 STAG2Q8N3U4 1231 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 PURBQ96QR8 312 aaKnown RBP17.85■□□□□ 0.45
NUP50-219ENST00000497960 PRO3102Q9H379 93 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 JMJD4Q9H9V9 463 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 VTA1Q9NP79 307 aa17.85■□□□□ 0.45
NUP50-219ENST00000497960 MOXD2PA6NHM9 499 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 B4DLN1 442 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 SLC27A2O14975 620 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 SLC34A2O95436 690 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 MRPL12P52815 198 aaKnown RBP17.84■□□□□ 0.45
NUP50-219ENST00000497960 EEPD1Q7L9B9 569 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 CATIPQ7Z7H3 387 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 MCF2L2Q86YR7 1114 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 PCSK9Q8NBP7 692 aaKnown RBP17.84■□□□□ 0.45
NUP50-219ENST00000497960 KLHDC9Q8NEP7 349 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 MORC4Q8TE76 937 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 NUP133Q8WUM0 1156 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 GDF15Q99988 308 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 MAF1Q9H063 256 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 MAD2L2Q9UI95 211 aa17.84■□□□□ 0.45
NUP50-219ENST00000497960 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
NUP50-219ENST00000497960 A0A1W2PPC1 479 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 A0A1W2PQ45 241 aaPredicted RBP17.83■□□□□ 0.44
NUP50-219ENST00000497960 A0A1W2PQY0 241 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 PALM3A6NDB9 673 aaPredicted RBP17.83■□□□□ 0.44
NUP50-219ENST00000497960 CST5P28325 142 aaPredicted RBP17.83■□□□□ 0.44
NUP50-219ENST00000497960 MAGEA10P43363 369 aaPredicted RBP17.83■□□□□ 0.44
NUP50-219ENST00000497960 ACLYP53396 1101 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 GJA9P57773 515 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 ANTXR2P58335 489 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 GRM4Q14833 912 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 SNX17Q15036 470 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 KCNA10Q16322 511 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 TRIM60Q495X7 471 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 C1orf53Q5VUE5 145 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 CREB3L3Q68CJ9 461 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 IQSEC1Q6DN90 963 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 FBXO16Q8IX29 292 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms