RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FAM133BQ5BKY9 247 aaKnown RBP14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 GGT7Q9UJ14 662 aa14.49□□□□□ -0.09
GAPVD1-220ENST00000497580 ATXN2Q99700 1313 aaKnown RBP14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 SNX1Q13596 522 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 PLCB4Q15147 1175 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 ZNF483Q8TF39 744 aaPredicted RBP14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 LY9Q9HBG7 655 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 LGALS16A8MUM7 142 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 KIF3CO14782 793 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 CAPN11Q9UMQ6 739 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 OVOS2A0A0G2JMS6 1433 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 EYA2O00167 538 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 FTCDO95954 541 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 MCM7P33993 719 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 TDRD12Q587J7 1177 aaKnown RBP14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 MAEAQ7L5Y9 396 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 FBXL16Q8N461 479 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 ARFGAP2Q8N6H7 521 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 ZNF579Q8NAF0 562 aaKnown RBP14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 DNAJC7Q99615 494 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 NOVA2Q9UNW9 492 aaKnown RBP14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 SLC4A4Q9Y6R1 1079 aa14.48□□□□□ -0.09
GAPVD1-220ENST00000497580 SMIM23A6NLE4 172 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 RTN2O75298 545 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 TCP1P17987 556 aaKnown RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 CTNNA1P35221 906 aaKnown RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 CABP4P57796 275 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 GKAP1Q5VSY0 366 aaPredicted RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 ELOA2Q8IYF1 753 aaPredicted RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 SAAL1Q96ER3 474 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 AATFQ9NY61 560 aaKnown RBP eCLIP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 ZSWIM5Q9P217 1185 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 ATP6V1G2O95670 118 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 RASSF7Q02833 373 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 CAPRIN2Q6IMN6 1127 aaKnown RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 IQCKQ8N0W5 287 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 CCDC63Q8NA47 563 aa14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 FOXP1Q9H334 677 aaPredicted RBP14.47□□□□□ -0.09
GAPVD1-220ENST00000497580 ERICH2A1L162 156 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 ZNF263O14978 683 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 RPN1P04843 607 aaKnown RBP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 PTGDRQ13258 359 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 ITGB3BPQ13352 177 aaPredicted RBP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 ARMC3Q5W041 872 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 DDX42Q86XP3 938 aaKnown RBP eCLIP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 CASKIN2Q8WXE0 1202 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 MMRN2Q9H8L6 949 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 IRAK4Q9NWZ3 460 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 PCDHA13Q9Y5I0 950 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 HMGB1P1B2RPK0 211 aaPredicted RBP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 DIAPH2O60879 1101 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 ZFYP08048 801 aaPredicted RBP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 MAGEA1P43355 309 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 THEMIS2Q5TEJ8 643 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 TTLL7Q6ZT98 887 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 MDM1Q8TC05 714 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 IGDCC4Q8TDY8 1250 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 CAVIN3Q969G5 261 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 TUBGCP2Q9BSJ2 902 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 NAPBQ9H115 298 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 PTPRUQ92729 1446 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 EIF4A3P38919 411 aaKnown RBP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 CFAP221Q4G0U5 840 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 CSGALNACT2Q8N6G5 542 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 EXOC1Q9NV70 894 aa14.46□□□□□ -0.09
GAPVD1-220ENST00000497580 ANP32DO95626 131 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 WTAPQ15007 396 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 CCDC178Q5BJE1 867 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 CUL5Q93034 780 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 TMEM87BQ96K49 555 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 SPAG5Q96R06 1193 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 TSGA10Q9BZW7 698 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 DEXIO95424 95 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 IFNAR1P17181 557 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 ELF3P78545 371 aaPredicted RBP14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 RABL6Q3YEC7 729 aaPredicted RBP14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 C6orf89Q6UWU4 347 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 IRF2BP1Q8IU81 584 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 SELENOSQ9BQE4 189 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.45□□□□□ -0.17e-7■■■■□ 24.3
GAPVD1-220ENST00000497580 ADAMTSL3P82987 1691 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 KDM6AO15550 1401 aaPredicted RBP14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 STAT6P42226 847 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 DRP2Q13474 957 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 TCIRG1Q13488 830 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 TRIM68Q6AZZ1 485 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 SH3GL3Q99963 347 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 STK38LQ9Y2H1 464 aa14.45□□□□□ -0.1
GAPVD1-220ENST00000497580 MYH10P35580 1976 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 FAM170AA1A519 330 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 LRRC10BA6NIK2 292 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 H7C1D1 291 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 KIF11P52732 1056 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 TLDC1Q6P9B6 456 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms