RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 GBP3Q9H0R5 595 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 DYRK1BQ9Y463 629 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 A6NNZ2 444 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PRSS47A8MTI9 375 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 H3BRJ5 948 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 RGS13O14921 159 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA12O60330 932 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 GAS7O60861 476 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 DGAT1O75907 488 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 UPP2O95045 317 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 SMPD1P17405 629 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 GRK4P32298 578 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 HTRA3P83110 453 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 MAP4K2Q12851 820 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 IKBKEQ14164 716 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 LBRQ14739 615 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 CCDC93Q567U6 631 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 RRP12Q5JTH9 1297 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 IFIT1BQ5T764 474 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 MZT2AQ6P582 158 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 ADAT2Q7Z6V5 191 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 TRIM59Q8IWR1 403 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 SLFN12Q8IYM2 578 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 CNPY4Q8N129 248 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 BTN2A2Q8WVV5 523 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 KCTD13Q8WZ19 329 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 NAP1L5Q96NT1 182 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 KRT82Q9NSB4 513 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 TRMT13Q9NUP7 481 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 MKS1Q9NXB0 559 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 FNIP2Q9P278 1114 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 POLG2Q9UHN1 485 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 EMC9Q9Y3B6 208 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGB3Q9Y5G1 929 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA9Q9Y5G4 932 aaKnown RBP7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA8Q9Y5G5 932 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA7Q9Y5G6 932 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA6Q9Y5G7 932 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA3Q9Y5H0 932 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHGA2Q9Y5H1 932 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 MRFAP1Q9Y605 127 aa7.41□□□□□ -1.22
BRCA1-224ENST00000497488 TTC24A2A3L6 582 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-224ENST00000497488 PPM1BO75688 479 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 UBOX5O94941 541 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
BRCA1-224ENST00000497488 TM4SF4P48230 202 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 GPSM2P81274 684 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 DDX10Q13206 875 aaKnown RBP7.4□□□□□ -1.22
BRCA1-224ENST00000497488 PKDCCQ504Y2 493 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 DACT2Q5SW24 774 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 SRGAP1Q7Z6B7 1085 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 SUGP1Q8IWZ8 645 aaKnown RBP7.4□□□□□ -1.22
BRCA1-224ENST00000497488 PHACTR4Q8IZ21 702 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 FAM13CQ8NE31 585 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 ERP27Q96DN0 273 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 SPTLC3Q9NUV7 552 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 C14orf119Q9NWQ9 140 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 CLIC5Q9NZA1 410 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 MARK1Q9P0L2 795 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 ASAP1Q9ULH1 1129 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 RABGAP1Q9Y3P9 1069 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 PCDHA9Q9Y5H5 950 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 ASXL2Q76L83 1435 aa7.4□□□□□ -1.22
BRCA1-224ENST00000497488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 PRAMEF27A3QJZ7 478 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 TPP1O14773 563 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 AP1G1O43747 822 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 RHOBTB3O94955 611 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 AGR2O95994 175 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 ZBED1O96006 694 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 EIF2AK2P19525 551 aaKnown RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 YARSP54577 528 aaKnown RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 GFRA1P56159 465 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 SESN3P58005 492 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 OCRLQ01968 901 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 SF1Q15637 639 aaKnown RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 TUBB8Q3ZCM7 444 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC184Q52MB2 194 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 DUSP27Q5VZP5 1158 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 DCAF15Q66K64 600 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 PPP4R3AQ6IN85 833 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 POMZP3Q6PJE2 187 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 LDHAL6AQ6ZMR3 332 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 MYLK4Q86YV6 388 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 RCC1LQ96I51 464 aaKnown RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 SGCZQ96LD1 299 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 TBATAQ96M53 351 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC86Q9H6F5 360 aaKnown RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 RSAD1Q9HA92 442 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 PRDM6Q9NQX0 595 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 THG1LQ9NWX6 298 aaKnown RBP7.39□□□□□ -1.23
BRCA1-224ENST00000497488 WHRNQ9P202 907 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 AKT3Q9Y243 479 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms