RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 SPATA20Q8TB22 786 aa15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 PAGE5Q96GU1 130 aa15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 NAT10Q9H0A0 1025 aaKnown RBP15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 VCPKMTQ9H867 229 aa15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 HOOK1Q9UJC3 728 aaKnown RBP15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 PRR12Q9ULL5 1215 aa15.52■□□□□ 0.08
SPTBN1-205ENST00000496323 PP2D1A8MPX8 630 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L15C9J2P7 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L11C9JVI0 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L18D6R9N7 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L22D6RA61 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L19D6RCP7 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L20D6RJB6 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 ASNSP08243 561 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 OR52Z1P0C646 297 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L24Q0WX57 530 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 USP17L6PQ6QN14 398 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 TRPM4Q8TD43 1214 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 AMNQ9BXJ7 453 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 MAN1B1Q9UKM7 699 aa15.52■□□□□ 0.07
SPTBN1-205ENST00000496323 ARFGEF1Q9Y6D6 1849 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 TDP2O95551 362 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 STAT2P52630 851 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 ZYXQ15942 572 aaKnown RBP15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 PDXDC2PQ6P474 469 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 GPRC5DQ9NZD1 345 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 H7C1D1 291 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 MEIS2O14770 477 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 SLC37A4O43826 429 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 ORC2Q13416 577 aaPredicted RBP15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 HS1BP3Q53T59 392 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 NBPF12Q5TAG4 269 aaPredicted RBP15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 FBXO11Q86XK2 927 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 MTMR9Q96QG7 549 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 P2RX7Q99572 595 aaKnown RBP15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 MTRQ99707 1265 aa15.51■□□□□ 0.07
SPTBN1-205ENST00000496323 BECN2A8MW95 431 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 GOLGA6L19H0YKK7 550 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 CASP1P29466 404 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 AFMP43652 599 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 NCAPHQ15003 741 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 ANGEL2Q5VTE6 544 aaKnown RBP15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 GPC2Q8N158 579 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 IQUBQ8NA54 791 aa15.5■□□□□ 0.07
SPTBN1-205ENST00000496323 OPLAHO14841 1288 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 KARSQ15046 597 aaKnown RBP15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 USH1GQ495M9 461 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 SMARCE1Q969G3 411 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 ZNF341Q9BYN7 854 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 GLT8D2Q9H1C3 349 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 EPS15P42566 896 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 HIRAP54198 1017 aaPredicted RBP15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 DPYDQ12882 1025 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 MORC3Q14149 939 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 NAALADL2Q58DX5 795 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 PLA2G4DQ86XP0 818 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 CCSER1Q9C0I3 900 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 SH2D4AQ9H788 454 aa15.49■□□□□ 0.07
SPTBN1-205ENST00000496323 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 ZNF75DP51815 510 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 PPP4R3AQ6IN85 833 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 SARM1Q6SZW1 724 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 LRRC15Q8TF66 581 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 STAMQ92783 540 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 PYM1Q9BRP8 204 aaKnown RBP15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 DISC1Q9NRI5 854 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 ESPNB1AK53 854 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 PLA2G6O60733 806 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 INPP5BP32019 993 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 TECP42680 631 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 CALCRLQ16602 461 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 AK8Q96MA6 479 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 SYT17Q9BSW7 474 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 FBXO28Q9NVF7 368 aa15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.48■□□□□ 0.07
SPTBN1-205ENST00000496323 TXLNAP40222 546 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 IGSF22Q8N9C0 903 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 CHURC1Q8WUH1 139 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 CRYGNQ8WXF5 182 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 KIFC2Q96AC6 838 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 ANO3Q9BYT9 981 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 TRIM5Q9C035 493 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 HSD3B7Q9H2F3 369 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 RANBP17Q9H2T7 1088 aaKnown RBP15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 CCDC39Q9UFE4 941 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 UBA7P41226 1012 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 TXKP42681 527 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 TRIML1Q8N9V2 468 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 CCDC34Q96HJ3 373 aa15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 MMTAG2Q9BU76 263 aaKnown RBP15.47■□□□□ 0.07
SPTBN1-205ENST00000496323 IKBKBO14920 756 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms