RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
HLA-DQA1-207ENST00000496318 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
HLA-DQA1-207ENST00000496318 TNKSO95271 1327 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 A0A1W2PQ45 241 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 A0A1W2PQY0 241 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 HIP1O00291 1037 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ICAM1P05362 532 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 AKR1A1P14550 325 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 BEX3Q00994 111 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CCDC144BQ3MJ40 725 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 MAMDC4Q6UXC1 1216 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SLC39A5Q6ZMH5 540 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CHST3Q7LGC8 479 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ZSWIM5Q9P217 1185 aa13.64□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PTPDC1A2A3K4 754 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PLA2G6O60733 806 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CYP21A2P08686 494 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SNHG28P0DPA3 235 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 BAATQ14032 418 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 STAG2Q8N3U4 1231 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ARRDC4Q8NCT1 418 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ZSCAN10Q96SZ4 725 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 FBXO40Q9UH90 709 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 EYSQ5T1H1 3165 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CDH23Q9H251 3354 aa13.63□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 C6orf222P0C671 652 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ITGB8P26012 769 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CALML3P27482 149 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TLE2Q04725 743 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SLC35G1Q2M3R5 365 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PPP1R13LQ8WUF5 828 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 UBE2OQ9C0C9 1292 aaKnown RBP13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 KAT14Q9H8E8 782 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PDLIM7Q9NR12 457 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CTAGE5O15320 804 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SGSM2O43147 1006 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CAPN2P17655 700 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SEC23AQ15436 765 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 KCNA10Q16322 511 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CDC37Q16543 378 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 NOL8Q76FK4 1167 aaKnown RBP13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 Q7L0L9 218 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RAD50Q92878 1312 aa13.61□□□□□ -0.23
HLA-DQA1-207ENST00000496318 FDX1P10109 184 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SMPD1P17405 629 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ALDH5A1P51649 535 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ACLYP53396 1101 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ANTXR2P58335 489 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 SNX17Q15036 470 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TKFCQ3LXA3 575 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RNF180Q86T96 592 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 IQCA1Q86XH1 822 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ADGRF4Q8IZF3 695 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TET1Q8NFU7 2136 aa13.6□□□□□ -0.23
HLA-DQA1-207ENST00000496318 DHX16O60231 1041 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 DUSP11O75319 330 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 ASGR1P07306 291 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PCP11498 1178 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 QRICH1Q2TAL8 776 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 C9orf50Q5SZB4 431 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TAPT1Q6NXT6 567 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 DGKHQ86XP1 1220 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 BADQ92934 168 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 TTC14Q96N46 770 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 UBAC1Q9BSL1 405 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 COL20A1Q9P218 1284 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-207ENST00000496318 PRUNE2Q8WUY3 3088 aa13.58□□□□□ -0.23
HLA-DQA1-207ENST00000496318 E7EWF7 191 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms