RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 MSL3Q8N5Y2 521 aaKnown RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 SCLT1Q96NL6 688 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 FUCA2Q9BTY2 467 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 DCP1AQ9NPI6 582 aaPredicted RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 C6orf222P0C671 652 aaPredicted RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 ADORA2AP29274 412 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 GJA8P48165 433 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 HMGN5P82970 282 aaKnown RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 HS1BP3Q53T59 392 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 STAG1Q8WVM7 1258 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 CLCN1P35523 988 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 LRRC47Q8N1G4 583 aaKnown RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 NCOA7Q8NI08 942 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 LRRC37AA6NMS7 1700 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 HOXC6P09630 235 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 ANTXR2P58335 489 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 GPATCH4Q5T3I0 446 aaKnown RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 SYDE2Q5VT97 1194 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 NLRX1Q86UT6 975 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 TMTC2Q8N394 836 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 CCDC12Q8WUD4 166 aaPredicted RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 VAT1LQ9HCJ6 419 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 MORF4L1Q9UBU8 362 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 GJA5P36382 358 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 TRERF1Q96PN7 1200 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 KATNAL1Q9BW62 490 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 DDX4Q9NQI0 724 aaKnown RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 COL2A1P02458 1487 aaPredicted RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 H3BQV1 296 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 GNAT1P11488 350 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 SCAND2PQ9GZW5 306 aaPredicted RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 BRMS1Q9HCU9 246 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 TAF1P21675 1872 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 IFIT3O14879 490 aaKnown RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
VPS13B-206ENST00000496144 MCM5P33992 734 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 TTLL4Q14679 1199 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 FAM184AQ8NB25 1140 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 PPP2R3CQ969Q6 453 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 DYNLL2Q96FJ2 89 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 RNF146Q9NTX7 359 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 ATRNL1Q5VV63 1379 aa9.75□□□□□ -0.85
VPS13B-206ENST00000496144 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 CALM1P0DP23 149 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 CALM2P0DP24 149 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 CALM3P0DP25 149 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 BFSP2Q13515 415 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 PPP2R5BQ15173 497 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 GRIK5Q16478 980 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 ODR4Q5SWX8 454 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 OLFML2BQ68BL8 750 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 LEO1Q8WVC0 666 aaPredicted RBP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 RRP36Q96EU6 259 aaKnown RBP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 SPATA32Q96LK8 384 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 A0A0U1RQG5 324 aaPredicted RBP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 PRC1O43663 620 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 C16orf86Q6ZW13 317 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 CHST3Q7LGC8 479 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 TBC1D10CQ8IV04 446 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 ABRAQ8N0Z2 381 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 RAVER2Q9HCJ3 691 aaKnown RBP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 ZFPM1Q8IX07 1006 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 RNPC3Q96LT9 517 aaKnown RBP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 NKRFO15226 690 aaKnown RBP eCLIP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 OAZ1P54368 228 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 TNFAIP2Q03169 654 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 FERMT3Q86UX7 667 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 NID2Q14112 1375 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 HAND2P61296 217 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 CCT2P78371 535 aaKnown RBP9.74□□□□□ -0.85
VPS13B-206ENST00000496144 ALX1Q15699 326 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 RAB30Q15771 203 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 SLC17A8Q8NDX2 589 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 MLXIPQ9HAP2 919 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 SYNPO2Q9UMS6 1093 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 TMX2Q9Y320 296 aa9.74□□□□□ -0.85
VPS13B-206ENST00000496144 ESPNB1AK53 854 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 CPLX1O14810 134 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 BCRP11274 1271 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 RHBDL3P58872 404 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 C12orf60Q5U649 245 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 KCNV1Q6PIU1 500 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 NEDD4P46934 1319 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 DNM1LO00429 736 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 PQBP1O60828 265 aaKnown RBP9.73□□□□□ -0.85
VPS13B-206ENST00000496144 ADD1P35611 737 aaKnown RBP9.73□□□□□ -0.85
VPS13B-206ENST00000496144 RIOX2Q8IUF8 465 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 OR6J1Q8NGC5 347 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 NCOA5Q9HCD5 579 aaKnown RBP9.73□□□□□ -0.85
VPS13B-206ENST00000496144 RTP1P59025 263 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 WTAPQ15007 396 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 ASPRV1Q53RT3 343 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms