RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 PIGSQ96S52 555 aa17.27■□□□□ 0.36
GAPDH-210ENST00000496049 JMJD4Q9H9V9 463 aa17.27■□□□□ 0.36
GAPDH-210ENST00000496049 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
GAPDH-210ENST00000496049 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
GAPDH-210ENST00000496049 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
GAPDH-210ENST00000496049 hCG_1642624A0A1W2PR95 340 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 SYT1P21579 422 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 OSBPP22059 807 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 DDIT3P35638 169 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 GJA5P36382 358 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 FOSBP53539 338 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 PPP1R18Q6NYC8 613 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
GAPDH-210ENST00000496049 CCL15-CCL14A0A0B4J2E2 113 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 DTNBO60941 627 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 ZBED4O75132 1171 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 CALML3P27482 149 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 NAPAP54920 295 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
GAPDH-210ENST00000496049 COG2Q14746 738 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 CCL15Q16663 113 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 QRICH1Q2TAL8 776 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 AMNQ9BXJ7 453 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
GAPDH-210ENST00000496049 FBXO28Q9NVF7 368 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 BARHL2Q9NY43 387 aa17.25■□□□□ 0.35
GAPDH-210ENST00000496049 ALPK3Q96L96 1907 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
GAPDH-210ENST00000496049 MTFR1Q15390 333 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 PKN1Q16512 942 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 TREML2Q5T2D2 321 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 WWC2Q6AWC2 1192 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 FBXO11Q86XK2 927 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 FBXO18Q8NFZ0 1043 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 GTF3C2Q8WUA4 911 aaPredicted RBP17.24■□□□□ 0.35
GAPDH-210ENST00000496049 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
GAPDH-210ENST00000496049 HOXC10Q9NYD6 342 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 SLC45A1Q9Y2W3 748 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 A0A0G2JMZ2 1700 aa17.24■□□□□ 0.35
GAPDH-210ENST00000496049 COL9A1P20849 921 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 NLRP5P59047 1200 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 KRT40Q6A162 431 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 CCDC174Q6PII3 467 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 MB21D1Q8N884 522 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 AIFM3Q96NN9 605 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 MTMR10Q9NXD2 777 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
GAPDH-210ENST00000496049 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
GAPDH-210ENST00000496049 STXBP3O00186 592 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 MMP1P03956 469 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 ICAM1P05362 532 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
GAPDH-210ENST00000496049 DSG3P32926 999 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 GUCY1B3Q02153 619 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 ARHGEF6Q15052 776 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 PTPN18Q99952 460 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 PCDHA1Q9Y5I3 950 aa17.22■□□□□ 0.35
GAPDH-210ENST00000496049 SPTBN5Q9NRC6 3674 aaKnown RBP17.22■□□□□ 0.35
GAPDH-210ENST00000496049 ABCB11O95342 1321 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 ECM2O94769 699 aaPredicted RBP17.21■□□□□ 0.35
GAPDH-210ENST00000496049 BRD1O95696 1058 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 GNA11P29992 359 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 KRT2P35908 639 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 ADCY7P51828 1080 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 OAZ1P54368 228 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 USH1GQ495M9 461 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
GAPDH-210ENST00000496049 PHF20Q9BVI0 1012 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 RAPGEFL1Q9UHV5 662 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 MTMR6Q9Y217 621 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 RLFQ13129 1914 aa17.21■□□□□ 0.35
GAPDH-210ENST00000496049 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
GAPDH-210ENST00000496049 SPDYE16A6NNV3 312 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-210ENST00000496049 VWA5AO00534 786 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 SNAP25P60880 206 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 MOGSQ13724 837 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-210ENST00000496049 BRI3BPQ8WY22 251 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 CUL5Q93034 780 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 ARHGAP39Q9C0H5 1083 aa17.2■□□□□ 0.34
GAPDH-210ENST00000496049 ASCC2Q9H1I8 757 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-210ENST00000496049 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms