RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SNAI1O95863 264 aaPredicted RBP11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 PPP4CP60510 307 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 ACVR2BQ13705 512 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 CCDC144BQ3MJ40 725 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 RIOX2Q8IUF8 465 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 ADHFE1Q8IWW8 467 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 SLC43A3Q8NBI5 491 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 EHD4Q9H223 541 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 MUTYHQ9UIF7 546 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 MTUS1Q9ULD2 1270 aa11.72□□□□□ -0.53
SMARCAL1-213ENST00000496037 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 ADCY6O43306 1168 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 USP5P45974 858 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 KCNJ6P48051 423 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 BEX3Q00994 111 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 SEPT2Q15019 361 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 NOL8Q76FK4 1167 aaKnown RBP11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 BMP8AQ7Z5Y6 402 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 ATOH1Q92858 354 aaPredicted RBP11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 VWCEQ96DN2 955 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 POP1Q99575 1024 aaKnown RBP11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMARCAL1-213ENST00000496037 FOCADQ5VW36 1801 aa11.71□□□□□ -0.54
SMARCAL1-213ENST00000496037 A0A1W2PRG0 241 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 ZEB2O60315 1214 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 RFC2P35250 354 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 IRS1P35568 1242 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 STAT3P40763 770 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 ID4P47928 161 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 HERC4Q5GLZ8 1057 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 EP400NLQ6ZTU2 488 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 ZBED2Q9BTP6 218 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 PA2G4Q9UQ80 394 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-213ENST00000496037 ZFHX4Q86UP3 3567 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 SUPT20HL2P0C7V6 817 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 PDE4DQ08499 809 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 ADGRA1Q86SQ6 560 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 SPICE1Q8N0Z3 855 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 EDAQ92838 391 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 TGS1Q96RS0 853 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 SH2D4AQ9H788 454 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 CDK5RAP2Q96SN8 1893 aa11.69□□□□□ -0.54
SMARCAL1-213ENST00000496037 ZNFX1Q9P2E3 1918 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 TMEM221A6NGB7 291 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 M0R296 226 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 BAIAP3O94812 1187 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 SHMT1P34896 483 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 MCAMP43121 646 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 FSCN1Q16658 493 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 TLK2Q86UE8 772 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
SMARCAL1-213ENST00000496037 GRIN2DO15399 1336 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 PTPRCP08575 1304 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 CTAGE5O15320 804 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 KRT37O76014 449 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 UQCRFS1P1P0C7P4 283 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 UBTFL1P0CB47 393 aaPredicted RBP11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 CYP2C9P11712 490 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 ERVK-21P61565 698 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 NKX3-2P78367 333 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 PTPROQ16827 1216 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 CERS3Q8IU89 383 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 RNF135Q8IUD6 432 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 AP5M1Q9H0R1 490 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 ALDH8A1Q9H2A2 487 aaPredicted RBP11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
SMARCAL1-213ENST00000496037 DMDP11532 3685 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 TNKSO95271 1327 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 VWA5AO00534 786 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 DPYSL4O14531 572 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 TRIM66O15016 1216 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 PSMC6P62333 389 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 DYNLL1P63167 89 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms