RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 TCEANC2Q96MN5 208 aa23.31■■□□□ 1.32
COL9A2-210ENST00000495948 RIOX1Q9H6W3 641 aa23.31■■□□□ 1.32
COL9A2-210ENST00000495948 NRBP1Q9UHY1 535 aa23.31■■□□□ 1.32
COL9A2-210ENST00000495948 ABCB11O95342 1321 aa23.31■■□□□ 1.32
COL9A2-210ENST00000495948 SYNGAP1Q96PV0 1343 aa23.31■■□□□ 1.32
COL9A2-210ENST00000495948 MYH6P13533 1939 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 NFIBO00712 420 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 SLC35G1Q2M3R5 365 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 APOA5Q6Q788 366 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 FAM133AQ8N9E0 248 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 FGD4Q96M96 766 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 DEFB118Q96PH6 123 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 TINF2Q9BSI4 451 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 SPZ1Q9BXG8 430 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 MAF1Q9H063 256 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 CYP39A1Q9NYL5 469 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 LRRC37A2A6NM11 1700 aa23.3■■□□□ 1.32
COL9A2-210ENST00000495948 SMCHD1A6NHR9 2005 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 POTEB2H3BUK9 544 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 ZBTB5O15062 677 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 SGPL1O95470 568 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 EN2P19622 333 aaPredicted RBP23.29■■□□□ 1.32
COL9A2-210ENST00000495948 CASTP20810 708 aaKnown RBP23.29■■□□□ 1.32
COL9A2-210ENST00000495948 RPS6KB1P23443 525 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 RCAN1P53805 252 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 USH1GQ495M9 461 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 MAMDC4Q6UXC1 1216 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 MICU3Q86XE3 530 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 FBXL16Q8N461 479 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 CLEC4DQ8WXI8 215 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 LZTS2Q9BRK4 669 aa23.29■■□□□ 1.32
COL9A2-210ENST00000495948 CYTH3O43739 400 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 SMARCA1P28370 1054 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 CCND3P30281 292 aaPredicted RBP23.28■■□□□ 1.32
COL9A2-210ENST00000495948 GNAQP50148 359 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 NSMFQ6X4W1 530 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 FBXO11Q86XK2 927 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 AMNQ9BXJ7 453 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 CRISPLD2Q9H0B8 497 aa23.28■■□□□ 1.32
COL9A2-210ENST00000495948 MSCO60682 206 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 CPA1P15085 419 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 SYNE3Q6ZMZ3 975 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 TRPV1Q8NER1 839 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 AGXT2Q9BYV1 514 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 TM6SF1Q9BZW5 370 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 VAT1LQ9HCJ6 419 aa23.27■■□□□ 1.32
COL9A2-210ENST00000495948 NID2Q14112 1375 aa23.27■■□□□ 1.31
COL9A2-210ENST00000495948 RXRAP19793 462 aa23.26■■□□□ 1.31
COL9A2-210ENST00000495948 FGD1P98174 961 aa23.26■■□□□ 1.31
COL9A2-210ENST00000495948 CNTN2Q02246 1040 aa23.26■■□□□ 1.31
COL9A2-210ENST00000495948 TRAF1Q13077 416 aa23.26■■□□□ 1.31
COL9A2-210ENST00000495948 SLC30A10Q6XR72 485 aa23.26■■□□□ 1.31
COL9A2-210ENST00000495948 HOMER1Q86YM7 354 aa23.26■■□□□ 1.31
COL9A2-210ENST00000495948 KLF18A0A0U1RQI7 1052 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 ZBTB43O43298 467 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 PPP1R11O60927 126 aaPredicted RBP23.25■■□□□ 1.31
COL9A2-210ENST00000495948 PLEKHA8P1O95397 391 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 ANAPC15P60006 121 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 TMTC3Q6ZXV5 915 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 FANCBQ8NB91 859 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 RGS22Q8NE09 1264 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 PIGSQ96S52 555 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 ZSWIM6Q9HCJ5 1215 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 RBM28Q9NW13 759 aaKnown RBP23.25■■□□□ 1.31
COL9A2-210ENST00000495948 DDX20Q9UHI6 824 aaKnown RBP23.25■■□□□ 1.31
COL9A2-210ENST00000495948 BRPF3Q9ULD4 1205 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 CNPY2Q9Y2B0 182 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 MRPL11Q9Y3B7 192 aaKnown RBP23.25■■□□□ 1.31
COL9A2-210ENST00000495948 ASTN1O14525 1302 aa23.25■■□□□ 1.31
COL9A2-210ENST00000495948 LOC102724159A0A0B4J2E5 919 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 PNMA6FA0A0J9YX94 578 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 PTPDC1A2A3K4 754 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 SEPT4O43236 478 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 MLLT1Q03111 559 aaPredicted RBP23.24■■□□□ 1.31
COL9A2-210ENST00000495948 BAATQ14032 418 aaPredicted RBP23.24■■□□□ 1.31
COL9A2-210ENST00000495948 PWP2Q15269 919 aaKnown RBP23.24■■□□□ 1.31
COL9A2-210ENST00000495948 RNF207Q6ZRF8 634 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 Q6ZUG5 572 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 RUFY3Q7L099 469 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 ARMCX2Q7L311 632 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 RAB11FIP4Q86YS3 637 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 OGDHLQ9ULD0 1010 aa23.24■■□□□ 1.31
COL9A2-210ENST00000495948 SOWAHBA6NEL2 793 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 ASB14A6NK59 587 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 RPS6P62753 249 aaKnown RBP23.23■■□□□ 1.31
COL9A2-210ENST00000495948 GHRHRQ02643 423 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 C8orf34Q49A92 452 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 LHX8Q68G74 356 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 MCF2L2Q86YR7 1114 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
COL9A2-210ENST00000495948 ANKLE1Q8NAG6 615 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 BRF1Q92994 677 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 IL17RAQ96F46 866 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.23■■□□□ 1.31
COL9A2-210ENST00000495948 ADD3Q9UEY8 706 aaKnown RBP23.23■■□□□ 1.31
COL9A2-210ENST00000495948 CYP46A1Q9Y6A2 500 aa23.23■■□□□ 1.31
COL9A2-210ENST00000495948 GOLGA8AA7E2F4 631 aa23.22■■□□□ 1.31
COL9A2-210ENST00000495948 GOLGA8BA8MQT2 603 aa23.22■■□□□ 1.31
COL9A2-210ENST00000495948 CNGA1P29973 690 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms