RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 ZNF648Q5T619 568 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 NUP43Q8NFH3 380 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 GOLGA2P5Q9HBQ8 144 aa8.28□□□□□ -1.08
NCKAP1-208ENST00000495619 STXBP3O00186 592 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 SUSD5O60279 629 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 TMEM253P0C7T8 217 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 PAMP19021 973 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 L1CAMP32004 1257 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 SYDE1Q6ZW31 735 aaPredicted RBP8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 ACSL6Q9UKU0 697 aa8.27□□□□□ -1.09
NCKAP1-208ENST00000495619 NOTOA8MTQ0 251 aa8.26□□□□□ -1.09
NCKAP1-208ENST00000495619 NFIBO00712 420 aa8.26□□□□□ -1.09
NCKAP1-208ENST00000495619 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
NCKAP1-208ENST00000495619 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
NCKAP1-208ENST00000495619 JMJD8Q96S16 334 aa8.26□□□□□ -1.09
NCKAP1-208ENST00000495619 IMPACTQ9P2X3 320 aa8.26□□□□□ -1.09
NCKAP1-208ENST00000495619 PEX10O60683 326 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 GJB6O95452 261 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 C8AP07357 584 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 CORO7P57737 925 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 MESP2Q0VG99 397 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 ZNF605Q86T29 641 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 TRIM59Q8IWR1 403 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 TMEM52Q8NDY8 209 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 KCNN1Q92952 543 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 PLCD4Q9BRC7 762 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 HIRIP3Q9BW71 556 aaPredicted RBP8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 ZNF552Q9H707 407 aaPredicted RBP8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 CYP26B1Q9NR63 512 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 ST7Q9NRC1 585 aa8.25□□□□□ -1.09
NCKAP1-208ENST00000495619 NPHP3-ACAD11A0A0J9YXS1 232 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 B2RBV5 119 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 HRKO00198 91 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 RAP1GAPP47736 663 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 SF3A1Q15459 793 aaKnown RBP8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 DDR2Q16832 855 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 GTF2IRD2BQ6EKJ0 949 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 GTF2IRD2Q86UP8 949 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 CABP7Q86V35 215 aa8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 ZNF513Q8N8E2 541 aaPredicted RBP8.24□□□□□ -1.09
NCKAP1-208ENST00000495619 IQCA1LA6NCM1 817 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 KLF4O43474 513 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 HOXC12P31275 282 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 GALK1P51570 392 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 ERVFRD-1P60508 538 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 RAB33AQ14088 237 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 NBPF6Q5VWK0 638 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 IQCEQ6IPM2 695 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 NLGN2Q8NFZ4 835 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 NBPF4Q96M43 638 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 PDLIM7Q9NR12 457 aa8.23□□□□□ -1.09
NCKAP1-208ENST00000495619 NPHS1O60500 1241 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 SEMA7AO75326 666 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 CPP00450 1065 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 ITGAVP06756 1048 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 GTF2F1P35269 517 aaKnown RBP eCLIP8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 SCRN1Q12765 414 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 NR1I3Q14994 352 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 MRGPRX3Q96LB0 322 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 MCMBPQ9BTE3 642 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 NKX2-4Q9H2Z4 354 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
NCKAP1-208ENST00000495619 TCAF2A6NFQ2 919 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 TSPAN15O95858 294 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 RAB3GAP1Q15042 981 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 SOGA3Q5TF21 947 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 BICRALQ6AI39 1079 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 ZNF227Q86WZ6 799 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 ANKLE2Q86XL3 938 aa8.21□□□□□ -1.1
NCKAP1-208ENST00000495619 TEX51A0A1B0GUA7 166 aa8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 SNRPB2P08579 225 aaKnown RBP8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 KCNJ6P48051 423 aa8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 SRSF3P84103 164 aaKnown RBP8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 MVKQ03426 396 aa8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 USP33Q8TEY7 942 aa8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 COPS5Q92905 334 aa8.2□□□□□ -1.1
NCKAP1-208ENST00000495619 GLDCP23378 1020 aa8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 MRM1Q6IN84 353 aaKnown RBP8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 LZTR1Q8N653 840 aa8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 ST13P5Q8NFI4 369 aaPredicted RBP8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 BTN2A2Q8WVV5 523 aa8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 SGSM3Q96HU1 749 aa8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 MMP19Q99542 508 aa8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 CLEC1BQ9P126 229 aa8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 DBR1Q9UK59 544 aaKnown RBP8.19□□□□□ -1.1
NCKAP1-208ENST00000495619 NUDT19A8MXV4 375 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 CYBBP04839 570 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 PLS3P13797 630 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 YBX1P67809 324 aaKnown RBP8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 HSP90AA2PQ14568 343 aaPredicted RBP8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 KIR3DS1Q14943 382 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 ZNF124Q15973 351 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 SLC10A6Q3KNW5 377 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 E4F1Q66K89 784 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms