RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-213	ENST00000495232	PIGS	Q96S52	555 aa		14.01	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MRPL11	Q9Y3B7	192 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ZNFX1	Q9P2E3	1918 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ZNF236	Q9UL36	1845 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PNMA6F	A0A0J9YX94	578 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CCDC85C	A6NKD9	419 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CYTH3	O43739	400 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PLEKHA8P1	O95397	391 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	HMGCR	P04035	888 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PGK2	P07205	417 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	HOXC6	P09630	235 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	NEK4	P51957	841 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	TOB2	Q14106	344 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MUM1L1	Q5H9M0	696 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	IFFO2	Q5TF58	517 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MFSD14C	Q5VZR4	134 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	NSMF	Q6X4W1	530 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	TMTC3	Q6ZXV5	915 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CMTR1	Q8N1G2	835 aa	Known RBP	14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	SRBD1	Q8N5C6	995 aa	Known RBP	14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ARMC5	Q96C12	935 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MTMR8	Q96EF0	704 aa		14	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PTPDC1	A2A3K4	754 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	POTEB2	H3BUK9	544 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	COBL	O75128	1261 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MYC	P01106	439 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	INHA	P05111	366 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	TAL1	P17542	331 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CCL14	Q16627	93 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MCF2L2	Q86YR7	1114 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	NPLOC4	Q8TAT6	608 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	TRIB2	Q92519	343 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	IL17RA	Q96F46	866 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ZNF274	Q96GC6	653 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	TMEM106C	Q9BVX2	250 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	A1CF	Q9NQ94	594 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	DIS3	Q9Y2L1	958 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PCDHA1	Q9Y5I3	950 aa		13.99	□□□□□ -0.17
CSNK1E-213	ENST00000495232	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	NFIB	O00712	420 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PDIA3	P30101	505 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ADD1	P35611	737 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	RBM25	P49756	843 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	EVC	P57679	992 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CCT2	P78371	535 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	AKAP17A	Q02040	695 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	OLFML2B	Q68BL8	750 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CPLX2	Q6PUV4	134 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	RNF207	Q6ZRF8	634 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MAML3	Q96JK9	1138 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ZNF333	Q96JL9	665 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	LARP6	Q9BRS8	491 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CYP39A1	Q9NYL5	469 aa		13.98	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PLXNA1	Q9UIW2	1896 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CPLX1	O14810	134 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CALML3	P27482	149 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CDC27	P30260	824 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	AK2	P54819	239 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	STK3	Q13188	491 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	BAAT	Q14032	418 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	SLC35G1	Q2M3R5	365 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ZNF792	Q3KQV3	632 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	RGS22	Q8NE09	1264 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CLEC4D	Q8WXI8	215 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MPHOSPH6	Q99547	160 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	BACH2	Q9BYV9	841 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MAF1	Q9H063	256 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	SLK	Q9H2G2	1235 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	HMX1	Q9NP08	348 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ADD3	Q9UEY8	706 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	SMCHD1	A6NHR9	2005 aa		13.97	□□□□□ -0.17
CSNK1E-213	ENST00000495232	DNAJC25-GNG10	A0A024R161	153 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CFB	P00751	764 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CCL5	P13501	91 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	PRKAR2A	P13861	404 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	CYP2C19	P33261	490 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	RPS6	P62753	249 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	NOL8	Q76FK4	1167 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	MSL3	Q8N5Y2	521 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	TINF2	Q9BSI4	451 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	RNF208	Q9H0X6	261 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	FLRT1	Q9NZU1	646 aa		13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	RBM27	Q9P2N5	1060 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232		V9GY48	417 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-213	ENST00000495232	NID2	Q14112	1375 aa		13.96	□□□□□ -0.18
CSNK1E-213	ENST00000495232	RPTOR	Q8N122	1335 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	CNTNAP5	Q8WYK1	1306 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	hCG_1642624	A0A1W2PR95	340 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	ASB14	A6NK59	587 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232		B4DLN1	442 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	PPP1R11	O60927	126 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	MRPL12	P52815	198 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	CNTN2	Q02246	1040 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	CACNB2	Q08289	660 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	RABEP1	Q15276	862 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	MTFR1	Q15390	333 aa		13.95	□□□□□ -0.18
CSNK1E-213	ENST00000495232	HEATR3	Q7Z4Q2	680 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms