RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 GJA8P48165 433 aa19.94■□□□□ 0.78
SNX17-209ENST00000494893 MFSD14CQ5VZR4 134 aa19.94■□□□□ 0.78
SNX17-209ENST00000494893 NFXL1Q6ZNB6 911 aa19.94■□□□□ 0.78
SNX17-209ENST00000494893 U2AF1L4Q8WU68 220 aaKnown RBP19.94■□□□□ 0.78
SNX17-209ENST00000494893 PURBQ96QR8 312 aaKnown RBP19.94■□□□□ 0.78
SNX17-209ENST00000494893 HMX1Q9NP08 348 aaPredicted RBP19.94■□□□□ 0.78
SNX17-209ENST00000494893 SLC5A4Q9NY91 659 aa19.94■□□□□ 0.78
SNX17-209ENST00000494893 CYP39A1Q9NYL5 469 aa19.94■□□□□ 0.78
SNX17-209ENST00000494893 SOWAHBA6NEL2 793 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 CCDC69A6NI79 296 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 PLEKHA8P1O95397 391 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 SGPL1O95470 568 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 USH1GQ495M9 461 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 PRAMEF19Q5SWL8 479 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 TINF2Q9BSI4 451 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 CRISPLD2Q9H0B8 497 aa19.93■□□□□ 0.78
SNX17-209ENST00000494893 PLXNA1Q9UIW2 1896 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 LCTP09848 1927 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 DHX16O60231 1041 aaKnown RBP19.92■□□□□ 0.78
SNX17-209ENST00000494893 HMGB1P09429 215 aaKnown RBP19.92■□□□□ 0.78
SNX17-209ENST00000494893 RPS6KB1P23443 525 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 LHX8Q68G74 356 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 BLOC1S2Q6QNY1 142 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 CCDC144CPQ8IYA2 1237 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 PIGSQ96S52 555 aa19.92■□□□□ 0.78
SNX17-209ENST00000494893 DDX49Q9Y6V7 483 aaKnown RBP19.92■□□□□ 0.78
SNX17-209ENST00000494893 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 OPLAHO14841 1288 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 SNAI1O95863 264 aaPredicted RBP19.91■□□□□ 0.78
SNX17-209ENST00000494893 CASTP20810 708 aaKnown RBP19.91■□□□□ 0.78
SNX17-209ENST00000494893 BAATQ14032 418 aaPredicted RBP19.91■□□□□ 0.78
SNX17-209ENST00000494893 MAMDC4Q6UXC1 1216 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 SLC30A10Q6XR72 485 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 Q6ZUG5 572 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 ZNF467Q7Z7K2 595 aaPredicted RBP19.91■□□□□ 0.78
SNX17-209ENST00000494893 CMTR1Q8N1G2 835 aaKnown RBP19.91■□□□□ 0.78
SNX17-209ENST00000494893 SRBD1Q8N5C6 995 aaKnown RBP19.91■□□□□ 0.78
SNX17-209ENST00000494893 TBC1D5Q92609 795 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 AGXT2Q9BYV1 514 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 ZSWIM6Q9HCJ5 1215 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 TSHZ2Q9NRE2 1034 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 SLC12A7Q9Y666 1083 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 PFASO15067 1338 aa19.91■□□□□ 0.78
SNX17-209ENST00000494893 ZBTB5O15062 677 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 UBE2Q1Q7Z7E8 422 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 MICU3Q86XE3 530 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 FBXO11Q86XK2 927 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 FANCBQ8NB91 859 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 CTCFLQ8NI51 663 aaPredicted RBP19.9■□□□□ 0.78
SNX17-209ENST00000494893 SPZ1Q9BXG8 430 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 PNMA2Q9UL42 364 aa19.9■□□□□ 0.78
SNX17-209ENST00000494893 TNRC18O15417 2968 aaPredicted RBP19.9■□□□□ 0.78
SNX17-209ENST00000494893 MKI67P46013 3256 aaKnown RBP19.9■□□□□ 0.78
SNX17-209ENST00000494893 KLF18A0A0U1RQI7 1052 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 ABCB11O95342 1321 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 ZNF865P0CJ78 1059 aaPredicted RBP19.89■□□□□ 0.77
SNX17-209ENST00000494893 MNX1P50219 401 aaPredicted RBP19.89■□□□□ 0.77
SNX17-209ENST00000494893 APOBRQ0VD83 1088 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 HOMER1Q86YM7 354 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 FBXL16Q8N461 479 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 SYNGAP1Q96PV0 1343 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 TM6SF1Q9BZW5 370 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 KATNBL1Q9H079 304 aa19.89■□□□□ 0.77
SNX17-209ENST00000494893 UPF2Q9HAU5 1272 aaKnown RBP19.89■□□□□ 0.77
SNX17-209ENST00000494893 FAM217BQ9NTX9 383 aaPredicted RBP19.89■□□□□ 0.77
SNX17-209ENST00000494893 CALM1P0DP23 149 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 CALM2P0DP24 149 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 CALM3P0DP25 149 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 PSMA5P28066 241 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 KIF5BP33176 963 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 RPS6P62753 249 aaKnown RBP19.88■□□□□ 0.77
SNX17-209ENST00000494893 TMTC3Q6ZXV5 915 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 RUFY3Q7L099 469 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 MSL3Q8N5Y2 521 aaKnown RBP19.88■□□□□ 0.77
SNX17-209ENST00000494893 PIBF1Q8WXW3 757 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 BRF1Q92994 677 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 AMNQ9BXJ7 453 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 OGDHLQ9ULD0 1010 aa19.88■□□□□ 0.77
SNX17-209ENST00000494893 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 SMARCA1P28370 1054 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 FUT2Q10981 343 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
SNX17-209ENST00000494893 RNF207Q6ZRF8 634 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 ARMCX2Q7L311 632 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 RGS22Q8NE09 1264 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 IL17RAQ96F46 866 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 UPF3BQ9BZI7 483 aaKnown RBP19.87■□□□□ 0.77
SNX17-209ENST00000494893 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.87■□□□□ 0.77
SNX17-209ENST00000494893 COL20A1Q9P218 1284 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 DDX20Q9UHI6 824 aaKnown RBP19.87■□□□□ 0.77
SNX17-209ENST00000494893 NRBP1Q9UHY1 535 aa19.87■□□□□ 0.77
SNX17-209ENST00000494893 PNMA6FA0A0J9YX94 578 aa19.86■□□□□ 0.77
SNX17-209ENST00000494893 SEPT4O43236 478 aa19.86■□□□□ 0.77
SNX17-209ENST00000494893 ZBTB43O43298 467 aa19.86■□□□□ 0.77
SNX17-209ENST00000494893 TFRCP02786 760 aaKnown RBP19.86■□□□□ 0.77
SNX17-209ENST00000494893 CALML3P27482 149 aa19.86■□□□□ 0.77
SNX17-209ENST00000494893 CNGA1P29973 690 aa19.86■□□□□ 0.77
SNX17-209ENST00000494893 CDC27P30260 824 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms