RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ESYT1Q9BSJ8 1104 aa38.83■■■■□ 3.81
CBX4-203ENST00000494546 PTPDC1A2A3K4 754 aa38.82■■■■□ 3.8
CBX4-203ENST00000494546 BAATQ14032 418 aaPredicted RBP38.82■■■■□ 3.8
CBX4-203ENST00000494546 BMP2KLQ5H9B9 411 aa38.82■■■■□ 3.8
CBX4-203ENST00000494546 CCDC136Q96JN2 1154 aa38.82■■■■□ 3.8
CBX4-203ENST00000494546 PURBQ96QR8 312 aaKnown RBP38.82■■■■□ 3.8
CBX4-203ENST00000494546 WDR19Q8NEZ3 1342 aa38.82■■■■□ 3.8
CBX4-203ENST00000494546 CCDC144BQ3MJ40 725 aa38.81■■■■□ 3.8
CBX4-203ENST00000494546 STOX1Q6ZVD7 989 aa38.81■■■■□ 3.8
CBX4-203ENST00000494546 ASTN1O14525 1302 aa38.81■■■■□ 3.8
CBX4-203ENST00000494546 MCM3APO60318 1980 aa38.81■■■■□ 3.8
CBX4-203ENST00000494546 IFIT3O14879 490 aaKnown RBP38.8■■■■□ 3.8
CBX4-203ENST00000494546 DHX16O60231 1041 aaKnown RBP38.8■■■■□ 3.8
CBX4-203ENST00000494546 CDC37Q16543 378 aaPredicted RBP38.8■■■■□ 3.8
CBX4-203ENST00000494546 USH1GQ495M9 461 aa38.8■■■■□ 3.8
CBX4-203ENST00000494546 ADGRF4Q8IZF3 695 aa38.8■■■■□ 3.8
CBX4-203ENST00000494546 CLEC4DQ8WXI8 215 aa38.8■■■■□ 3.8
CBX4-203ENST00000494546 LSG1Q9H089 658 aaKnown RBP38.8■■■■□ 3.8
CBX4-203ENST00000494546 DDX49Q9Y6V7 483 aaKnown RBP38.8■■■■□ 3.8
CBX4-203ENST00000494546 ERICH2A1L162 156 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 RTP1P59025 263 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 SLC39A5Q6ZMH5 540 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 CHST3Q7LGC8 479 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 KATNBL1Q9H079 304 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 PRO3102Q9H379 93 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 PHF24Q9UPV7 400 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 SYNRGQ9UMZ2 1314 aa38.79■■■■□ 3.8
CBX4-203ENST00000494546 ADAMTS4O75173 837 aa38.78■■■■□ 3.8
CBX4-203ENST00000494546 DUSP11O75319 330 aaKnown RBP38.78■■■■□ 3.8
CBX4-203ENST00000494546 SLC34A2O95436 690 aa38.78■■■■□ 3.8
CBX4-203ENST00000494546 VAT1LQ9HCJ6 419 aa38.78■■■■□ 3.8
CBX4-203ENST00000494546 ATP11BQ9Y2G3 1177 aa38.78■■■■□ 3.8
CBX4-203ENST00000494546 ADCY6O43306 1168 aa38.77■■■■□ 3.8
CBX4-203ENST00000494546 CALML3P27482 149 aa38.77■■■■□ 3.8
CBX4-203ENST00000494546 SLC30A10Q6XR72 485 aa38.77■■■■□ 3.8
CBX4-203ENST00000494546 RNF207Q6ZRF8 634 aa38.77■■■■□ 3.8
CBX4-203ENST00000494546 PCDH10Q9P2E7 1040 aa38.77■■■■□ 3.8
CBX4-203ENST00000494546 SART3Q15020 963 aaKnown RBP38.76■■■■□ 3.8
CBX4-203ENST00000494546 STAG2Q8N3U4 1231 aa38.76■■■■□ 3.8
CBX4-203ENST00000494546 ADD3Q9UEY8 706 aaKnown RBP38.76■■■■□ 3.8
CBX4-203ENST00000494546 EEPD1Q7L9B9 569 aa38.75■■■■□ 3.79
CBX4-203ENST00000494546 SENP2Q9HC62 589 aa38.75■■■■□ 3.79
CBX4-203ENST00000494546 ANO2Q9NQ90 1003 aa38.75■■■■□ 3.79
CBX4-203ENST00000494546 WTAPQ15007 396 aa38.74■■■■□ 3.79
CBX4-203ENST00000494546 NOL8Q76FK4 1167 aaKnown RBP38.74■■■■□ 3.79
CBX4-203ENST00000494546 JMJD4Q9H9V9 463 aa38.74■■■■□ 3.79
CBX4-203ENST00000494546 MAGEA10P43363 369 aaPredicted RBP38.73■■■■□ 3.79
CBX4-203ENST00000494546 ALDH5A1P51649 535 aaPredicted RBP38.73■■■■□ 3.79
CBX4-203ENST00000494546 QRICH1Q2TAL8 776 aa38.73■■■■□ 3.79
CBX4-203ENST00000494546 MB21D2Q8IYB1 491 aaPredicted RBP38.73■■■■□ 3.79
CBX4-203ENST00000494546 GDF15Q99988 308 aa38.73■■■■□ 3.79
CBX4-203ENST00000494546 SPC25Q9HBM1 224 aa38.73■■■■□ 3.79
CBX4-203ENST00000494546 C11orf97A0A1B0GVM6 126 aaPredicted RBP38.72■■■■□ 3.79
CBX4-203ENST00000494546 MYADML2A6NDP7 307 aa38.72■■■■□ 3.79
CBX4-203ENST00000494546 C6orf222P0C671 652 aaPredicted RBP38.72■■■■□ 3.79
CBX4-203ENST00000494546 RPS6P62753 249 aaKnown RBP38.72■■■■□ 3.79
CBX4-203ENST00000494546 TNFAIP2Q03169 654 aa38.72■■■■□ 3.79
CBX4-203ENST00000494546 TRIM60Q495X7 471 aa38.72■■■■□ 3.79
CBX4-203ENST00000494546 TMEM67Q5HYA8 995 aa38.72■■■■□ 3.79
CBX4-203ENST00000494546 FBXO16Q8IX29 292 aaPredicted RBP38.72■■■■□ 3.79
CBX4-203ENST00000494546 KLHDC9Q8NEP7 349 aa38.72■■■■□ 3.79
CBX4-203ENST00000494546 TSEN34Q9BSV6 310 aaKnown RBP38.72■■■■□ 3.79
CBX4-203ENST00000494546 MAD2L2Q9UI95 211 aa38.72■■■■□ 3.79
CBX4-203ENST00000494546 LCTP09848 1927 aa38.71■■■■□ 3.79
CBX4-203ENST00000494546 A0A1W2PQ45 241 aaPredicted RBP38.71■■■■□ 3.79
CBX4-203ENST00000494546 A0A1W2PQY0 241 aa38.71■■■■□ 3.79
CBX4-203ENST00000494546 KLRF2D3W0D1 207 aa38.71■■■■□ 3.79
CBX4-203ENST00000494546 FXR1P51114 621 aaKnown RBP eCLIP38.71■■■■□ 3.79
CBX4-203ENST00000494546 ANTXR2P58335 489 aa38.71■■■■□ 3.79
CBX4-203ENST00000494546 IRX5P78411 483 aaPredicted RBP38.71■■■■□ 3.79
CBX4-203ENST00000494546 SNX17Q15036 470 aa38.71■■■■□ 3.79
CBX4-203ENST00000494546 ABCB11O95342 1321 aa38.7■■■■□ 3.79
CBX4-203ENST00000494546 SLC27A2O14975 620 aa38.7■■■■□ 3.79
CBX4-203ENST00000494546 KCNA10Q16322 511 aa38.7■■■■□ 3.79
CBX4-203ENST00000494546 FBXO11Q86XK2 927 aa38.7■■■■□ 3.79
CBX4-203ENST00000494546 MORC4Q8TE76 937 aa38.7■■■■□ 3.79
CBX4-203ENST00000494546 PDGFCQ9NRA1 345 aa38.7■■■■□ 3.79
CBX4-203ENST00000494546 NEFLP07196 543 aa38.69■■■■□ 3.78
CBX4-203ENST00000494546 ACLYP53396 1101 aa38.69■■■■□ 3.78
CBX4-203ENST00000494546 UPF3AQ9H1J1 476 aaKnown RBP38.69■■■■□ 3.78
CBX4-203ENST00000494546 VTA1Q9NP79 307 aa38.69■■■■□ 3.78
CBX4-203ENST00000494546 PRKAG2Q9UGJ0 569 aa38.69■■■■□ 3.78
CBX4-203ENST00000494546 PALM3A6NDB9 673 aaPredicted RBP38.68■■■■□ 3.78
CBX4-203ENST00000494546 GJA9P57773 515 aa38.68■■■■□ 3.78
CBX4-203ENST00000494546 GRM4Q14833 912 aa38.68■■■■□ 3.78
CBX4-203ENST00000494546 CREB3L3Q68CJ9 461 aa38.68■■■■□ 3.78
CBX4-203ENST00000494546 CASC1Q6TDU7 716 aa38.68■■■■□ 3.78
CBX4-203ENST00000494546 IGDCC4Q8TDY8 1250 aa38.68■■■■□ 3.78
CBX4-203ENST00000494546 MOXD2PA6NHM9 499 aa38.67■■■■□ 3.78
CBX4-203ENST00000494546 CST5P28325 142 aaPredicted RBP38.67■■■■□ 3.78
CBX4-203ENST00000494546 CCSAPQ6IQ19 270 aaPredicted RBP38.67■■■■□ 3.78
CBX4-203ENST00000494546 TAPT1Q6NXT6 567 aa38.67■■■■□ 3.78
CBX4-203ENST00000494546 TRIOBPQ9H2D6 2365 aa38.67■■■■□ 3.78
CBX4-203ENST00000494546 LRRC37A2A6NM11 1700 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 LOC102724159A0A0B4J2E5 919 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 CDC45O75419 566 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 SMPD1P17405 629 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 BMP8BP34820 402 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 MDM2Q00987 491 aaPredicted RBP38.66■■■■□ 3.78
CBX4-203ENST00000494546 NECTIN1Q15223 517 aa38.66■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms