RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 CCDC178Q5BJE1 867 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 BTNL9Q6UXG8 535 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 KIAA1211Q6ZU35 1233 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 KCTD1Q719H9 257 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 FAM160B2Q86V87 743 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 IQCA1Q86XH1 822 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 MB21D2Q8IYB1 491 aaPredicted RBP10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ZSCAN10Q96SZ4 725 aaPredicted RBP10.3□□□□□ -0.76
ITGB1-217ENST00000494395 NUDT12Q9BQG2 462 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ANO2Q9NQ90 1003 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 KIAA1468Q9P260 1216 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 LCTP09848 1927 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 KIAA0100Q14667 2235 aaKnown RBP10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ZNF536O15090 1300 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 FRMPD3Q5JV73 1810 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 ARHGAP33O14559 1287 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 HOXC6P09630 235 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 EMP3P54852 163 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 ZNF543Q08ER8 600 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 MTFR1Q15390 333 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 TTBK2Q6IQ55 1244 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 CASC1Q6TDU7 716 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 ABRAQ8N0Z2 381 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 PNMA1Q8ND90 353 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 NCOA7Q8NI08 942 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 CHURC1Q8WUH1 139 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 TRIB2Q92519 343 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 KIFC2Q96AC6 838 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 APBA2Q99767 749 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 POLR3EQ9NVU0 708 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 RIPK3Q9Y572 518 aa10.29□□□□□ -0.76
ITGB1-217ENST00000494395 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 STRNO43815 780 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 SLC25A27O95847 323 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 FDX1P10109 184 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 CD46P15529 392 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 ADORA2AP29274 412 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 STAT3P40763 770 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 OAZ1P54368 228 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 SOX10P56693 466 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 TRDNQ13061 729 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 PLS1Q14651 629 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 NBPF11Q86T75 865 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 NPLOC4Q8TAT6 608 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 IGDCC4Q8TDY8 1250 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 KCNB2Q92953 911 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 CHMP4CQ96CF2 233 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 TEX13BQ9BXU2 312 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 MROH8Q9H579 483 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 SENP2Q9HC62 589 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 MTMR7Q9Y216 660 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 MYH6P13533 1939 aa10.28□□□□□ -0.76
ITGB1-217ENST00000494395 FRMPD2Q68DX3 1309 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-217ENST00000494395 COBLO75128 1261 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 ZBED4O75132 1171 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 HMGCRP04035 888 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 INHAP05111 366 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 CYP2B6P20813 491 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 COPB2P35606 906 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 RGS2P41220 211 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 TRIM32Q13049 653 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 CCL14Q16627 93 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 CCDC96Q2M329 555 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 GPATCH4Q5T3I0 446 aaKnown RBP10.27□□□□□ -0.77
ITGB1-217ENST00000494395 MAP3K21Q5TCX8 1036 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 SNRNP48Q6IEG0 339 aaKnown RBP10.27□□□□□ -0.77
ITGB1-217ENST00000494395 RALYLQ86SE5 291 aaKnown RBP10.27□□□□□ -0.77
ITGB1-217ENST00000494395 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 UBAC1Q9BSL1 405 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 RANBP17Q9H2T7 1088 aaKnown RBP10.27□□□□□ -0.77
ITGB1-217ENST00000494395 KAT14Q9H8E8 782 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 RAVER2Q9HCJ3 691 aaKnown RBP10.27□□□□□ -0.77
ITGB1-217ENST00000494395 FLRT1Q9NZU1 646 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 IVNS1ABPQ9Y6Y0 642 aa10.27□□□□□ -0.77
ITGB1-217ENST00000494395 DNAJC25-GNG10A0A024R161 153 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 IFIT3O14879 490 aaKnown RBP10.26□□□□□ -0.77
ITGB1-217ENST00000494395 CCL5P13501 91 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 SLC16A2P36021 539 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 SNAP25P60880 206 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 ADCK5Q3MIX3 580 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 IFIT1BQ5T764 474 aaKnown RBP10.26□□□□□ -0.77
ITGB1-217ENST00000494395 SYDE2Q5VT97 1194 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 WDR78Q5VTH9 848 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 CHST3Q7LGC8 479 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 CCAR1Q8IX12 1150 aaKnown RBP10.26□□□□□ -0.77
ITGB1-217ENST00000494395 TRMT44Q8IYL2 757 aaKnown RBP10.26□□□□□ -0.77
ITGB1-217ENST00000494395 CPXCR1Q8N123 301 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 SHISA4Q96DD7 197 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 LY9Q9HBG7 655 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms