RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 POLR2BP30876 1174 aaKnown RBP3.95□□□□□ -1.78
PTPN12-212ENST00000494248 BMP8BP34820 402 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 FHL2Q14192 279 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 CSRP2Q16527 193 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 SMN1Q16637 294 aaKnown RBP3.95□□□□□ -1.78
PTPN12-212ENST00000494248 BICRALQ6AI39 1079 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 ZNF585AQ6P3V2 769 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 CRTC3Q6UUV7 619 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 GLB1LQ6UWU2 654 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 PHC3Q8NDX5 983 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 DNERQ8NFT8 737 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 ZBTB8AQ96BR9 441 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 ZNF512BQ96KM6 892 aaPredicted RBP3.95□□□□□ -1.78
PTPN12-212ENST00000494248 ASB16Q96NS5 453 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 RNF19AQ9NV58 838 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 F6X3S4 739 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 RNF4P78317 190 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 SPDYAQ5MJ70 313 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 MEI1Q5TIA1 1274 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 ZSCAN29Q8IWY8 852 aaPredicted RBP3.94□□□□□ -1.78
PTPN12-212ENST00000494248 LGI4Q8N135 537 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 LINC00482Q8N8I6 264 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 ALG3Q92685 438 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 GFOD1Q9NXC2 390 aa3.94□□□□□ -1.78
PTPN12-212ENST00000494248 ARSHQ5FYA8 562 aa3.93□□□□□ -1.78
PTPN12-212ENST00000494248 C9orf131Q5VYM1 1079 aa3.93□□□□□ -1.78
PTPN12-212ENST00000494248 CHFRQ96EP1 664 aa3.93□□□□□ -1.78
PTPN12-212ENST00000494248 DDX11Q96FC9 970 aa3.93□□□□□ -1.78
PTPN12-212ENST00000494248 PDLIM7Q9NR12 457 aa3.93□□□□□ -1.78
PTPN12-212ENST00000494248 FBLN5Q9UBX5 448 aa3.93□□□□□ -1.78
PTPN12-212ENST00000494248 MROH6A6NGR9 719 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 NPIPB8E9PQR5 432 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 B4GALT3O60512 393 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 GLI4P10075 376 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 GNA15P30679 374 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 INHBEP58166 350 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 TGFB2P61812 414 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 CDCP2Q5VXM1 449 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 TTLL7Q6ZT98 887 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 CCDC84Q86UT8 332 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-212ENST00000494248 GATAD2BQ8WXI9 593 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 GORASP1Q9BQQ3 440 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 SLC12A9Q9BXP2 914 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN12-212ENST00000494248 IKZF4Q9H2S9 585 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 ANTXR1Q9H6X2 564 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 DLL4Q9NR61 685 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 TIMELESSQ9UNS1 1208 aa3.92□□□□□ -1.78
PTPN12-212ENST00000494248 A0A1W2PQ27 194 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 A0A1W2PQ64 194 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 A0A1W2PQC6 194 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 A0A1W2PQD8 194 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 BPNT1O95861 308 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 RLBP1P12271 317 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 EIF4BP23588 611 aaKnown RBP3.91□□□□□ -1.78
PTPN12-212ENST00000494248 CACNB2Q08289 660 aaPredicted RBP3.91□□□□□ -1.78
PTPN12-212ENST00000494248 KIAA2012Q0VF49 1180 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 CAMK2GQ13555 558 aaPredicted RBP3.91□□□□□ -1.78
PTPN12-212ENST00000494248 MCTP2Q6DN12 878 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 ERICH6Q7L0X2 663 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 FBXO27Q8NI29 283 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 CPA5Q8WXQ8 436 aa3.91□□□□□ -1.78
PTPN12-212ENST00000494248 CDK5RAP1Q96SZ6 601 aaKnown RBP3.91□□□□□ -1.78
PTPN12-212ENST00000494248 LAMTOR5O43504 91 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 PF4P02776 101 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 P4HBP07237 508 aaKnown RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 C8BP07358 591 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 GSTM1P09488 218 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 ENDOUP21128 410 aaKnown RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 RPL13P26373 211 aaKnown RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 THBS2P35442 1172 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 NANOS3P60323 173 aaKnown RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 HLA-DQA1Q5Y7H0 255 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 HOMEZQ8IX15 550 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 TXNDC5Q8NBS9 432 aaKnown RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 TSPAN17Q96FV3 270 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 PTPN18Q99952 460 aa3.9□□□□□ -1.79
PTPN12-212ENST00000494248 DBR1Q9UK59 544 aaKnown RBP3.9□□□□□ -1.79
PTPN12-212ENST00000494248 BRD1O95696 1058 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 LDHBP07195 334 aaKnown RBP3.89□□□□□ -1.79
PTPN12-212ENST00000494248 RAG1P15918 1043 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 CHMP4BP1P59074 171 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 FAM26FQ5R3K3 315 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 PRR31Q5SQ13 230 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 JAMLQ86YT9 394 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 TMEM192Q8IY95 271 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 IGDCC4Q8TDY8 1250 aa3.89□□□□□ -1.79
PTPN12-212ENST00000494248 C11orf84Q9BUA3 381 aaPredicted RBP3.89□□□□□ -1.79
PTPN12-212ENST00000494248 NOC4LQ9BVI4 516 aaKnown RBP3.89□□□□□ -1.79
PTPN12-212ENST00000494248 A0A1W2PQJ5 194 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 FGF10O15520 208 aaPredicted RBP3.88□□□□□ -1.79
PTPN12-212ENST00000494248 PRPF40AO75400 957 aaKnown RBP3.88□□□□□ -1.79
PTPN12-212ENST00000494248 RANGAP1P46060 587 aaPredicted RBP3.88□□□□□ -1.79
PTPN12-212ENST00000494248 LMNB2Q03252 620 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 DIEXFQ68CQ4 756 aaKnown RBP3.88□□□□□ -1.79
PTPN12-212ENST00000494248 BORAQ6PGQ7 559 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 STK32CQ86UX6 486 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 CEP89Q96ST8 783 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms