RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 PDLIM7Q9NR12 457 aa8.5□□□□□ -1.05
CAB39-206ENST00000493540 GPSM3Q9Y4H4 160 aa8.5□□□□□ -1.05
CAB39-206ENST00000493540 MYH7BA7E2Y1 1941 aa8.5□□□□□ -1.05
CAB39-206ENST00000493540 SIP14410 1827 aa8.5□□□□□ -1.05
CAB39-206ENST00000493540 TRAK2O60296 914 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 COBLO75128 1261 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 GLRX3O76003 335 aaKnown RBP8.49□□□□□ -1.05
CAB39-206ENST00000493540 CYP2C19P33261 490 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 RTP1P59025 263 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 MAP3K12Q12852 859 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 ZYXQ15942 572 aaKnown RBP8.49□□□□□ -1.05
CAB39-206ENST00000493540 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 MFSD14CQ5VZR4 134 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 RHPN1Q8TCX5 695 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 FRAT1Q92837 279 aaPredicted RBP8.49□□□□□ -1.05
CAB39-206ENST00000493540 MAML3Q96JK9 1138 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 FEZ1Q99689 392 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 CCDC8Q9H0W5 538 aaPredicted RBP8.49□□□□□ -1.05
CAB39-206ENST00000493540 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 ZNF214Q9UL59 606 aaPredicted RBP8.49□□□□□ -1.05
CAB39-206ENST00000493540 TMX2Q9Y320 296 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
CAB39-206ENST00000493540 NLRC5Q86WI3 1866 aa8.49□□□□□ -1.05
CAB39-206ENST00000493540 TMEM265A0A087WTH1 108 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 ZBBXA8MT70 800 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 SMIM22K7EJ46 135 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 WDR46O15213 610 aaKnown RBP8.48□□□□□ -1.05
CAB39-206ENST00000493540 ADAMTS4O75173 837 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 ERCC3P19447 782 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 ADD2P35612 726 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 USP5P45974 858 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 WNT7BP56706 349 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 SH3BP2P78314 561 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 COG2Q14746 738 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 RAB3GAP1Q15042 981 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 TTF1Q15361 905 aaPredicted RBP8.48□□□□□ -1.05
CAB39-206ENST00000493540 C16orf86Q6ZW13 317 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 BPHLQ86WA6 291 aaPredicted RBP8.48□□□□□ -1.05
CAB39-206ENST00000493540 SLC44A5Q8NCS7 719 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 EMID1Q96A84 441 aaPredicted RBP8.48□□□□□ -1.05
CAB39-206ENST00000493540 MROH8Q9H579 483 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 PHF24Q9UPV7 400 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 EXOC6BQ9Y2D4 811 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 ZNF532Q9HCE3 1301 aa8.48□□□□□ -1.05
CAB39-206ENST00000493540 TCF20Q9UGU0 1960 aaKnown RBP8.48□□□□□ -1.05
CAB39-206ENST00000493540 DNAJC25-GNG10A0A024R161 153 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 NKX3-2P78367 333 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 SMAD3P84022 425 aaKnown RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 NR1H3Q13133 447 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 AGERQ15109 404 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 LRRC41Q15345 812 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 FAM47AQ5JRC9 791 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 C12orf60Q5U649 245 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 CCSAPQ6IQ19 270 aaPredicted RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 SLC39A5Q6ZMH5 540 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 AACSQ86V21 672 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 CLEC10AQ8IUN9 316 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 ATG4CQ96DT6 458 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 ARHGAP9Q9BRR9 750 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 CRNKL1Q9BZJ0 848 aaKnown RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 TTYH1Q9H313 450 aaPredicted RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 ATP8A2Q9NTI2 1148 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 ZBTB40Q9NUA8 1239 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 DIS3Q9Y2L1 958 aaKnown RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
CAB39-206ENST00000493540 V9GY48 417 aaPredicted RBP8.47□□□□□ -1.05
CAB39-206ENST00000493540 TRIOO75962 3097 aa8.46□□□□□ -1.05
CAB39-206ENST00000493540 IGKV6D-41A0A0C4DH26 115 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 TRIM43BA6NCK2 446 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 ATP2A1O14983 1001 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 KIAA0355O15063 1070 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 ZNF865P0CJ78 1059 aaPredicted RBP8.46□□□□□ -1.06
CAB39-206ENST00000493540 CYP2D6P10635 497 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 AKR1B1P15121 316 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 ITGB8P26012 769 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 CST5P28325 142 aaPredicted RBP8.46□□□□□ -1.06
CAB39-206ENST00000493540 OS9Q13438 667 aaPredicted RBP8.46□□□□□ -1.06
CAB39-206ENST00000493540 TMEM132BQ14DG7 1078 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 ZNF792Q3KQV3 632 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 TRIM60Q495X7 471 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 HSP90AB4PQ58FF6 505 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 C9orf50Q5SZB4 431 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 SLC9C2Q5TAH2 1124 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 RASIP1Q5U651 963 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 RIOX2Q8IUF8 465 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
CAB39-206ENST00000493540 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.06
CAB39-206ENST00000493540 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.06
CAB39-206ENST00000493540 TRIM43Q96BQ3 446 aaPredicted RBP8.46□□□□□ -1.06
CAB39-206ENST00000493540 KIF1BPQ96EK5 621 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 CCDC17Q96LX7 622 aa8.46□□□□□ -1.06
CAB39-206ENST00000493540 FGD4Q96M96 766 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms