RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TBC1D8O95759 1140 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 NCKAP1LP55160 1127 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 TCEAL1Q15170 157 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 ZYXQ15942 572 aaKnown RBP5.51□□□□□ -1.53
PTCD3-218ENST00000493430 VMACQ2NL98 169 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 PLEKHN1Q494U1 663 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-218ENST00000493430 PPFIBP1Q86W92 1011 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 FIBCD1Q8N539 461 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 RNF34Q969K3 372 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 FAM86C1Q9NVL1 165 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 RTEL1Q9NZ71 1219 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 ZNF214Q9UL59 606 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-218ENST00000493430 ZNF451Q9Y4E5 1061 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
PTCD3-218ENST00000493430 IRS2Q9Y4H2 1338 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 WIZO95785 1651 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 A0A087WZG4 1122 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 OTOL1A6NHN0 477 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-218ENST00000493430 CYBBP04839 570 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 MSL3P1P0C860 447 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 ITGA4P13612 1032 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 SYN1P17600 705 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 PFKLP17858 780 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 POU4F1Q01851 419 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 TARBP2Q15633 366 aaKnown RBP5.5□□□□□ -1.53
PTCD3-218ENST00000493430 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 PAQR3Q6TCH7 311 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 RUFY4Q6ZNE9 571 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 SP8Q8IXZ3 490 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 NLGN1Q8N2Q7 840 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 LINC01356Q8N9X3 169 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 PTCHD1Q96NR3 888 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 FCRL3Q96P31 734 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-218ENST00000493430 CRBNQ96SW2 442 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 PDLIM7Q9NR12 457 aa5.5□□□□□ -1.53
PTCD3-218ENST00000493430 DDX41Q9UJV9 622 aaKnown RBP5.5□□□□□ -1.53
PTCD3-218ENST00000493430 DIS3Q9Y2L1 958 aaKnown RBP5.5□□□□□ -1.53
PTCD3-218ENST00000493430 SRGAP3O43295 1099 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 CORO7P57737 925 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 RACK1P63244 317 aaKnown RBP5.49□□□□□ -1.53
PTCD3-218ENST00000493430 ZNF200P98182 395 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-218ENST00000493430 COL9A2Q14055 689 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-218ENST00000493430 TMCO4Q5TGY1 634 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 BICRALQ6AI39 1079 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 NLGN2Q8NFZ4 835 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 CXorf38Q8TB03 319 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 FEZF2Q8TBJ5 459 aa5.49□□□□□ -1.53
PTCD3-218ENST00000493430 NOL6Q9H6R4 1146 aaKnown RBP5.49□□□□□ -1.53
PTCD3-218ENST00000493430 CD3EP07766 207 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 DBHP09172 617 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 IGFBP6P24592 240 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-218ENST00000493430 L1CAMP32004 1257 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 ERICH6BQ5W0A0 696 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 LSRQ86X29 649 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-218ENST00000493430 SPATA32Q96LK8 384 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 ZDHHC15Q96MV8 337 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 LUC7LQ9NQ29 371 aaKnown RBP5.48□□□□□ -1.53
PTCD3-218ENST00000493430 SLC12A7Q9Y666 1083 aa5.48□□□□□ -1.53
PTCD3-218ENST00000493430 IFNGR1P15260 489 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 CAP1Q01518 475 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 PPP2R5DQ14738 602 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 GNPTABQ3T906 1256 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 HAUS7Q99871 368 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 WHRNQ9P202 907 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 DBR1Q9UK59 544 aaKnown RBP5.47□□□□□ -1.53
PTCD3-218ENST00000493430 LTBP3Q9NS15 1303 aa5.47□□□□□ -1.53
PTCD3-218ENST00000493430 F8W031 263 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-218ENST00000493430 CBFA2T2O43439 604 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 LIMS1P48059 325 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 PRR5P85299 388 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 EEF1DP3Q658K8 133 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.54
PTCD3-218ENST00000493430 RCSD1Q6JBY9 416 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 CCDC81Q6ZN84 652 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 PHAXQ9H814 394 aaKnown RBP5.46□□□□□ -1.54
PTCD3-218ENST00000493430 GINM1Q9NU53 330 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 MROH2BQ7Z745 1585 aa5.46□□□□□ -1.54
PTCD3-218ENST00000493430 NESP48681 1621 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 ZBTB7CA1YPR0 619 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 SCAMP3O14828 347 aaKnown RBP5.45□□□□□ -1.54
PTCD3-218ENST00000493430 FFAR3O14843 346 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 TACR1P25103 407 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 EIF6P56537 245 aaKnown RBP5.45□□□□□ -1.54
PTCD3-218ENST00000493430 FOXO4P98177 505 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 PAK2Q13177 524 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 ADAT2Q7Z6V5 191 aaKnown RBP5.45□□□□□ -1.54
PTCD3-218ENST00000493430 CABP7Q86V35 215 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 TP53I13Q8NBR0 393 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-218ENST00000493430 ADCY4Q8NFM4 1077 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 TEPSINQ96N21 525 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 RNF38Q9H0F5 515 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 GBP3Q9H0R5 595 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 EFR3BQ9Y2G0 817 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 FAN1Q9Y2M0 1017 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms