RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 LCORLQ8N3X6 602 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 DNM3Q9UQ16 869 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PCK1P35558 622 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 RIPOR2Q9Y4F9 1068 aa23.23■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 EIF4A3P38919 411 aaKnown RBP23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MXRA7P84157 204 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 E2F4Q16254 413 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CEP128Q6ZU80 1094 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 VSIG1Q86XK7 387 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PPP1R14CQ8TAE6 165 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 DPH5Q9H2P9 285 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 TFCP2L1Q9NZI6 479 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ERBB3P21860 1342 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 KDM3AQ9Y4C1 1321 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CDC25AP30304 524 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 MCAMP43121 646 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 USP14P54578 494 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 DDB1Q16531 1140 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CCDC105Q8IYK2 499 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 STIM2Q9P246 746 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SRGAP2O75044 1071 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 GYG1P46976 350 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PLCB3Q01970 1234 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 STK24Q9Y6E0 443 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 XRCC5P13010 732 aaKnown RBP23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PLS1Q14651 629 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ARL6IP4Q66PJ3 421 aaKnown RBP23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 PPFIBP2Q8ND30 876 aa23.22■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SOS2Q07890 1332 aaPredicted RBP23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 UBN2Q6ZU65 1347 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CASP1P29466 404 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 VSNL1P62760 191 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 IRX2Q9BZI1 471 aaPredicted RBP23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ASIC3Q9UHC3 531 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 FAM169AQ9Y6X4 670 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 LGALS16A8MUM7 142 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 H2AFZP0C0S5 128 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 STAT1P42224 750 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 SLC7A5Q01650 507 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 H2AFVQ71UI9 128 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 HOMER3Q9NSC5 361 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 NR1D1P20393 614 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ARMCX3Q9UH62 379 aaPredicted RBP23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CTDNEP1O95476 244 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 LY9Q9HBG7 655 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 NEDD4P46934 1319 aa23.21■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 ANKARQ7Z5J8 1434 aa23.2■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 KIF11P52732 1056 aa23.2■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 WHAMMQ8TF30 809 aa23.2■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 GDAQ9Y2T3 454 aa23.2■■□□□ 1.31
CHKB-CPT1B-203ENST00000492556 NEURL4Q96JN8 1562 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CUL4BQ13620 913 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FAM26FQ5R3K3 315 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PANK4Q9NVE7 773 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PSD3Q9NYI0 1048 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FRMPD1Q5SYB0 1578 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 KLRF2D3W0D1 207 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CPS1P31327 1500 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 SMC6Q96SB8 1091 aa23.2■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 A0A1B0GTH6 734 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ZNF365Q70YC5 407 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 GPBP1Q86WP2 473 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 RASGRP4Q8TDF6 673 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CCDC169A6NNP5 214 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PLA2G4AP47712 749 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PTPROQ16827 1216 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TC2NQ8N9U0 490 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FHOD1Q9Y613 1164 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 HGSO14964 777 aaPredicted RBP23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MUM1L1Q5H9M0 696 aa23.19■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CHRNDQ07001 517 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 RABL6Q3YEC7 729 aaPredicted RBP23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MAPKAPK5Q8IW41 473 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 KIFAP3Q92845 792 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MRPL44Q9H9J2 332 aaKnown RBP23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 GLE1Q53GS7 698 aaKnown RBP23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 STAG1Q8WVM7 1258 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 DISC1Q9NRI5 854 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 BZW2Q9Y6E2 419 aaKnown RBP23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 GCNT3O95395 438 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ARMC9Q7Z3E5 817 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 COG1Q8WTW3 980 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TGFBRAP1Q8WUH2 860 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ACTR5Q9H9F9 607 aaPredicted RBP23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FDPSP14324 419 aaKnown RBP23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CEP83Q9Y592 693 aa23.18■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 OVOS2A0A0J9YW53 1432 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 OVOS2Q6IE36 1432 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ADAM9Q13443 819 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FYB2Q5VWT5 728 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CCDC197Q8NCU1 140 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 LARP4BQ92615 738 aaKnown RBP23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms