RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CAPN2P17655 700 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 CNGA1P29973 690 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 HSPA4P34932 840 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 LIFRP42702 1097 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 FXR1P51114 621 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 BAATQ14032 418 aaPredicted RBP8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 CDC37Q16543 378 aaPredicted RBP8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 QRICH1Q2TAL8 776 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 ANO1Q5XXA6 986 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 MSL3Q8N5Y2 521 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 PAWRQ96IZ0 340 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 TMEM87BQ96K49 555 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 MTA3Q9BTC8 594 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 MYL10Q9BUA6 226 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 USP26Q9BXU7 913 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 RIOX1Q9H6W3 641 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 DDX20Q9UHI6 824 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 NRBP1Q9UHY1 535 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 SNX14Q9Y5W7 946 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 SYNGAP1Q96PV0 1343 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 OPLAHO14841 1288 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 ADCY6O43306 1168 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 FARP2O94887 1054 aaPredicted RBP8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 COL6A1P12109 1028 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 CPA1P15085 419 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 SART3Q15020 963 aaKnown RBP8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 USH1GQ495M9 461 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 NSMFQ6X4W1 530 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 CATIPQ7Z7H3 387 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 CCDC144CPQ8IYA2 1237 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 ANKLE1Q8NAG6 615 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 TCEANC2Q96MN5 208 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 MAP3K14Q99558 947 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 BRPF3Q9ULD4 1205 aa8.38□□□□□ -1.07
PDLIM1-204ENST00000492511 PFASO15067 1338 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 ZBTB5O15062 677 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 DDAH1O94760 285 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 PLEKHA8P1O95397 391 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 RXRAP19793 462 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 RPS6P62753 249 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 ACVR2BQ13705 512 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 SLC30A10Q6XR72 485 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 SGMS1Q86VZ5 419 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 FBXO11Q86XK2 927 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 RAB11FIP4Q86YS3 637 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 TMTC2Q8N394 836 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 SRBD1Q8N5C6 995 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 MORC4Q8TE76 937 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 NUP133Q8WUM0 1156 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 PIGSQ96S52 555 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 TRIOBPQ9H2D6 2365 aa8.37□□□□□ -1.07
PDLIM1-204ENST00000492511 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 PTPDC1A2A3K4 754 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 CCDC69A6NI79 296 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 EPB41L2O43491 1005 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 DHX16O60231 1041 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 MSCO60682 206 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 REC8O95072 547 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 PTGS1P23219 599 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 CALML3P27482 149 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 IRX5P78411 483 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 KRT32Q14532 448 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 GJC2Q5T442 439 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 TAPT1Q6NXT6 567 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 NFXL1Q6ZNB6 911 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 RNF207Q6ZRF8 634 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 NECAB2Q7Z6G3 386 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 SYTL5Q8TDW5 730 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 JAKMIP1Q96N16 626 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 HTATIP2Q9BUP3 242 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 ABHD16BQ9H3Z7 469 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 PDGFCQ9NRA1 345 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 PNMA2Q9UL42 364 aa8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 COLQQ9Y215 455 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-204ENST00000492511 ABCB11O95342 1321 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 PNMA6FA0A0J9YX94 578 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 ASB14A6NK59 587 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 DNM1LO00429 736 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 CTAGE5O15320 804 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 ADAMTS4O75173 837 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 SEC24BO95487 1268 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 PGK1P00558 417 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 HMGB1P09429 215 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 AKR1A1P14550 325 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 RPS6KB1P23443 525 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 EDNRBP24530 442 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 SMARCA1P28370 1054 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 ALDH5A1P51649 535 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms