RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 ABCB11O95342 1321 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 CD2BP2O95400 341 aaKnown RBP26.88■■□□□ 1.89
SCN5A-213ENST00000491944 GNRH1P01148 92 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 FCER1AP12319 257 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 NTRK3Q16288 839 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 MUM1L1Q5H9M0 696 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 GTF3C6Q969F1 213 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 PCDHA1Q9Y5I3 950 aa26.88■■□□□ 1.89
SCN5A-213ENST00000491944 ZNFX1Q9P2E3 1918 aaKnown RBP26.88■■□□□ 1.89
SCN5A-213ENST00000491944 STRNO43815 780 aa26.87■■□□□ 1.89
SCN5A-213ENST00000491944 IFNAR1P17181 557 aa26.87■■□□□ 1.89
SCN5A-213ENST00000491944 PTPREP23469 700 aa26.87■■□□□ 1.89
SCN5A-213ENST00000491944 AKAP17AQ02040 695 aaKnown RBP26.87■■□□□ 1.89
SCN5A-213ENST00000491944 TRAF1Q13077 416 aa26.87■■□□□ 1.89
SCN5A-213ENST00000491944 SLC26A6Q9BXS9 759 aa26.87■■□□□ 1.89
SCN5A-213ENST00000491944 SH2B1Q9NRF2 756 aaPredicted RBP26.87■■□□□ 1.89
SCN5A-213ENST00000491944 SLC15A5A6NIM6 579 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 CDKL5O76039 1030 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 MCM2P49736 904 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 PRKCZQ05513 592 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 KCTD2Q14681 263 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 CTU1Q7Z7A3 348 aaKnown RBP26.86■■□□□ 1.89
SCN5A-213ENST00000491944 NUDT12Q9BQG2 462 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 SRRDQ9UH36 339 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 GABRQQ9UN88 632 aa26.86■■□□□ 1.89
SCN5A-213ENST00000491944 MRPL11Q9Y3B7 192 aaKnown RBP26.86■■□□□ 1.89
SCN5A-213ENST00000491944 RBBP6Q7Z6E9 1792 aaKnown RBP26.86■■□□□ 1.89
SCN5A-213ENST00000491944 NFIBO00712 420 aa26.85■■□□□ 1.89
SCN5A-213ENST00000491944 SSRP1Q08945 709 aaKnown RBP26.85■■□□□ 1.89
SCN5A-213ENST00000491944 HEATR3Q7Z4Q2 680 aa26.85■■□□□ 1.89
SCN5A-213ENST00000491944 TRIM22Q8IYM9 498 aa26.85■■□□□ 1.89
SCN5A-213ENST00000491944 ANKRD35Q8N283 1001 aa26.85■■□□□ 1.89
SCN5A-213ENST00000491944 SOCS4Q8WXH5 440 aa26.85■■□□□ 1.89
SCN5A-213ENST00000491944 ZNF236Q9UL36 1845 aa26.85■■□□□ 1.89
SCN5A-213ENST00000491944 PRPF3O43395 683 aaKnown RBP26.84■■□□□ 1.89
SCN5A-213ENST00000491944 ADORA2AP29274 412 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 GRB14Q14449 540 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 MORN1Q5T089 497 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 NSMFQ6X4W1 530 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 CCDC83Q8IWF9 413 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 ABRAQ8N0Z2 381 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 CLEC4DQ8WXI8 215 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 GPKOWQ92917 476 aaPredicted RBP eCLIP26.84■■□□□ 1.89
SCN5A-213ENST00000491944 RNF26Q9BY78 433 aaPredicted RBP26.84■■□□□ 1.89
SCN5A-213ENST00000491944 RBM27Q9P2N5 1060 aaKnown RBP26.84■■□□□ 1.89
SCN5A-213ENST00000491944 FLT3LGP49771 235 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 DDX11Q96FC9 970 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 GJD2Q9UKL4 321 aa26.84■■□□□ 1.89
SCN5A-213ENST00000491944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.83■■□□□ 1.88
SCN5A-213ENST00000491944 A1CFQ9NQ94 594 aaKnown RBP26.83■■□□□ 1.88
SCN5A-213ENST00000491944 PFASO15067 1338 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 PTPDC1A2A3K4 754 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 DTNBO60941 627 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 PGK2P07205 417 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 SCG2P13521 617 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 CYP2B6P20813 491 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 RGS2P41220 211 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 PRMT2P55345 433 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 ST3GAL1Q11201 340 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 MAP2K5Q13163 448 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 PFKFB3Q16875 520 aaPredicted RBP26.82■■□□□ 1.88
SCN5A-213ENST00000491944 WWC2Q6AWC2 1192 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 DPP9Q86TI2 863 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 RAET1EQ8TD07 263 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 TMX3Q96JJ7 454 aa26.82■■□□□ 1.88
SCN5A-213ENST00000491944 PLXNA1Q9UIW2 1896 aa26.81■■□□□ 1.88
SCN5A-213ENST00000491944 CTDNEP1O95476 244 aa26.81■■□□□ 1.88
SCN5A-213ENST00000491944 PKN1Q16512 942 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 RNF207Q6ZRF8 634 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 MCF2L2Q86YR7 1114 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 USP6NLQ92738 828 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 APBA2Q99767 749 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 CYP39A1Q9NYL5 469 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 PTPN22Q9Y2R2 807 aa26.8■■□□□ 1.88
SCN5A-213ENST00000491944 COBLO75128 1261 aa26.79■■□□□ 1.88
SCN5A-213ENST00000491944 DEXIO95424 95 aa26.79■■□□□ 1.88
SCN5A-213ENST00000491944 NAPAP54920 295 aa26.79■■□□□ 1.88
SCN5A-213ENST00000491944 BAATQ14032 418 aaPredicted RBP26.79■■□□□ 1.88
SCN5A-213ENST00000491944 NSUN7Q8NE18 718 aaKnown RBP26.79■■□□□ 1.88
SCN5A-213ENST00000491944 SLC5A4Q9NY91 659 aa26.79■■□□□ 1.88
SCN5A-213ENST00000491944 PTCH2Q9Y6C5 1203 aa26.79■■□□□ 1.88
SCN5A-213ENST00000491944 POTEB2H3BUK9 544 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 hCG_1984214I3L0E3 225 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 STXBP3O00186 592 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 OPLAHO14841 1288 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 CFBP00751 764 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 CALML3P27482 149 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 SLC30A10Q6XR72 485 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 ZNF713Q8N859 430 aaPredicted RBP26.78■■□□□ 1.88
SCN5A-213ENST00000491944 BARHL2Q9NY43 387 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 ORC3Q9UBD5 711 aaPredicted RBP26.78■■□□□ 1.88
SCN5A-213ENST00000491944 STK36Q9NRP7 1315 aa26.78■■□□□ 1.88
SCN5A-213ENST00000491944 JAK2O60674 1132 aa26.77■■□□□ 1.88
SCN5A-213ENST00000491944 RPS6P62753 249 aaKnown RBP26.77■■□□□ 1.88
SCN5A-213ENST00000491944 IRF5Q13568 498 aa26.77■■□□□ 1.88
SCN5A-213ENST00000491944 PKN2Q16513 984 aaKnown RBP26.77■■□□□ 1.88
SCN5A-213ENST00000491944 RGS22Q8NE09 1264 aa26.77■■□□□ 1.88
SCN5A-213ENST00000491944 NPLOC4Q8TAT6 608 aa26.77■■□□□ 1.88
SCN5A-213ENST00000491944 TBC1D5Q92609 795 aa26.77■■□□□ 1.88
SCN5A-213ENST00000491944 DNAJC25-GNG10A0A024R161 153 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms