RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 RAG1P15918 1043 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 TAL1P17542 331 aaPredicted RBP10.3□□□□□ -0.76
NUP50-217ENST00000491860 MRPL12P52815 198 aaKnown RBP10.3□□□□□ -0.76
NUP50-217ENST00000491860 NKX3-2P78367 333 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 NUCB1Q02818 461 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 TLE2Q04725 743 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 NMIQ13287 307 aaPredicted RBP10.3□□□□□ -0.76
NUP50-217ENST00000491860 GPATCH4Q5T3I0 446 aaKnown RBP10.3□□□□□ -0.76
NUP50-217ENST00000491860 VPS53Q5VIR6 699 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 IQSEC1Q6DN90 963 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 KCTD1Q719H9 257 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 IQCA1Q86XH1 822 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 ESR2Q92731 530 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 FAM227BQ96M60 508 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 HOMER2Q9NSB8 354 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 DIAPH3Q9NSV4 1193 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 CTNNA3Q9UI47 895 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 CCPG1Q9ULG6 757 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 ZNF536O15090 1300 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 A0A0U1RQG5 324 aaPredicted RBP10.29□□□□□ -0.76
NUP50-217ENST00000491860 SDSP20132 328 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 SHHQ15465 462 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 KCNA10Q16322 511 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
NUP50-217ENST00000491860 SYDE2Q5VT97 1194 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 CCSAPQ6IQ19 270 aaPredicted RBP10.29□□□□□ -0.76
NUP50-217ENST00000491860 DGKHQ86XP1 1220 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 CCDC144CPQ8IYA2 1237 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 AGBL1Q96MI9 1066 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 TMEM47Q9BQJ4 181 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 AP5M1Q9H0R1 490 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 RANBP17Q9H2T7 1088 aaKnown RBP10.29□□□□□ -0.76
NUP50-217ENST00000491860 VTA1Q9NP79 307 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 TMEM39AQ9NV64 488 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 CYP39A1Q9NYL5 469 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 WDR19Q8NEZ3 1342 aa10.29□□□□□ -0.76
NUP50-217ENST00000491860 LAMA4Q16363 1823 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 NMT2O60551 498 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
NUP50-217ENST00000491860 ASGR1P07306 291 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 TNFAIP2Q03169 654 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 FPGSQ05932 587 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 GNASQ5JWF2 1037 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
NUP50-217ENST00000491860 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 BADQ92934 168 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 VTI1AQ96AJ9 217 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 FGD4Q96M96 766 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 KATNBL1Q9H079 304 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
NUP50-217ENST00000491860 CNNM2Q9H8M5 875 aa10.28□□□□□ -0.76
NUP50-217ENST00000491860 TRIM43BA6NCK2 446 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 ARVCFO00192 962 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 PDHBP11177 359 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 ZNF543Q08ER8 600 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 PPIGQ13427 754 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUP50-217ENST00000491860 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
NUP50-217ENST00000491860 BRDTQ58F21 947 aaPredicted RBP10.27□□□□□ -0.77
NUP50-217ENST00000491860 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 TLK2Q86UE8 772 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 ZNF589Q86UQ0 364 aaPredicted RBP10.27□□□□□ -0.77
NUP50-217ENST00000491860 TMEM199Q8N511 208 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 RGS22Q8NE09 1264 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 DNERQ8NFT8 737 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 MORC4Q8TE76 937 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 MYLIPQ8WY64 445 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 TRIM43Q96BQ3 446 aaPredicted RBP10.27□□□□□ -0.77
NUP50-217ENST00000491860 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
NUP50-217ENST00000491860 DSCC1Q9BVC3 393 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 KRT23Q9C075 422 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 MTMR7Q9Y216 660 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 RAD50Q92878 1312 aa10.27□□□□□ -0.77
NUP50-217ENST00000491860 TTC28Q96AY4 2481 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 SOWAHBA6NEL2 793 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 NKRFO15226 690 aaKnown RBP eCLIP10.26□□□□□ -0.77
NUP50-217ENST00000491860 TIMP1P01033 207 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 FOSL2P15408 326 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 CDK7P50613 346 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 HAND2P61296 217 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 CNTN2Q02246 1040 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 FSCN1Q16658 493 aaKnown RBP10.26□□□□□ -0.77
NUP50-217ENST00000491860 CWC27Q6UX04 472 aaKnown RBP10.26□□□□□ -0.77
NUP50-217ENST00000491860 RNF207Q6ZRF8 634 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 RUFY2Q8WXA3 655 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 LENG1Q96BZ8 264 aaPredicted RBP10.26□□□□□ -0.77
NUP50-217ENST00000491860 RNPC3Q96LT9 517 aaKnown RBP10.26□□□□□ -0.77
NUP50-217ENST00000491860 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
NUP50-217ENST00000491860 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
NUP50-217ENST00000491860 GNEQ9Y223 722 aaKnown RBP10.26□□□□□ -0.77
NUP50-217ENST00000491860 PTPDC1A2A3K4 754 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 KPNA6O60684 536 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 CPT1AP50416 773 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 ALDH5A1P51649 535 aaPredicted RBP10.25□□□□□ -0.77
NUP50-217ENST00000491860 TRAF1Q13077 416 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms