RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 SPATA31A5Q5VU36 1347 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 SPATA31A7Q8IWB4 1347 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 TLDC2A0PJX2 215 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 ATP8B1O43520 1251 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
SNED1-211ENST00000491761 TCP11X2Q5H9J9 407 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 RAB34Q9BZG1 259 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 CDC23Q9UJX2 597 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 MRFAP1Q9Y605 127 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 TOGARAM1Q9Y4F4 1720 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 KLRF2D3W0D1 207 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 LAD1O00515 517 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 FGRP09769 529 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 CYLC1P35663 651 aaPredicted RBP11.99□□□□□ -0.49
SNED1-211ENST00000491761 BARGINQ6ZT62 677 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 CABP7Q86V35 215 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 LRRN4CLQ8ND94 238 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 DISC1Q9NRI5 854 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 GDAQ9Y2T3 454 aa11.99□□□□□ -0.49
SNED1-211ENST00000491761 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 CCNT1O60563 726 aaKnown RBP11.98□□□□□ -0.49
SNED1-211ENST00000491761 KRT83P78385 493 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 PDE4DQ08499 809 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 GRM4Q14833 912 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 C12orf60Q5U649 245 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 CDKAL1Q5VV42 579 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 SMIM5Q71RC9 77 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 OGFOD1Q8N543 542 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 CSGALNACT2Q8N6G5 542 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 LIMA1Q9UHB6 759 aaKnown RBP11.98□□□□□ -0.49
SNED1-211ENST00000491761 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 PPP1R2P41236 205 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 KRT27Q7Z3Y8 459 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 SRGAP1Q7Z6B7 1085 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 SH3RF3Q8TEJ3 882 aaPredicted RBP11.98□□□□□ -0.49
SNED1-211ENST00000491761 MRPL44Q9H9J2 332 aaKnown RBP11.98□□□□□ -0.49
SNED1-211ENST00000491761 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 XDHP47989 1333 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 PDS5AQ29RF7 1337 aaKnown RBP11.98□□□□□ -0.49
SNED1-211ENST00000491761 EBAG9O00559 213 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 MYL1P05976 194 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 DIXDC1Q155Q3 683 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 TMEM139Q8IV31 216 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 EYA3Q99504 573 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 MYH3P11055 1940 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 C4BP0C0L5 1744 aa11.98□□□□□ -0.49
SNED1-211ENST00000491761 ITIH6Q6UXX5 1313 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 SEC31AO94979 1220 aaKnown RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 FGFR1OPO95684 399 aaKnown RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 TERF2Q15554 542 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 STAG2Q8N3U4 1231 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 NUP98P52948 1817 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 CNTNAP4Q9C0A0 1308 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 SMCO2A6NFE2 343 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 UFL1O94874 794 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 OR52Z1P0C646 297 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 EEF1GP26641 437 aaKnown RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 PRCPP42785 496 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 TBC1D8BQ0IIM8 1120 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 BRD3Q15059 726 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 SLC35F6Q8N357 371 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 PPP1R12BO60237 982 aaPredicted RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 PARD6BQ9BYG5 372 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 CUEDC2Q9H467 287 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 MAGEF1Q9HAY2 307 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 VEZTQ9HBM0 779 aa11.97□□□□□ -0.49
SNED1-211ENST00000491761 EPN1Q9Y6I3 576 aaPredicted RBP11.97□□□□□ -0.49
SNED1-211ENST00000491761 DNM2P50570 870 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 TTC31Q49AM3 519 aaPredicted RBP11.96□□□□□ -0.49
SNED1-211ENST00000491761 UIMC1Q96RL1 719 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 ABHD10Q9NUJ1 306 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 AFF2P51816 1311 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 KRT86O43790 486 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 TUBBP07437 444 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 BTDP43251 543 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 FXR1P51114 621 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNED1-211ENST00000491761 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 TNFRSF25Q93038 417 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 AK8Q96MA6 479 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 TSG101Q99816 390 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 NUP58Q9BVL2 599 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.49
SNED1-211ENST00000491761 MYO1AQ9UBC5 1043 aa11.96□□□□□ -0.49
SNED1-211ENST00000491761 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 WHAMMP3Q1A5X7 153 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 CCDC122Q5T0U0 273 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms