RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 LBHD1Q9BQE6 289 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-211ENST00000491581 UBA5Q9GZZ9 404 aa10.53□□□□□ -0.72
HDAC3-211ENST00000491581 MTMR10Q9NXD2 777 aa10.53□□□□□ -0.72
HDAC3-211ENST00000491581 CCPG1Q9ULG6 757 aa10.53□□□□□ -0.72
HDAC3-211ENST00000491581 CNPY2Q9Y2B0 182 aa10.53□□□□□ -0.72
HDAC3-211ENST00000491581 LAMA2P24043 3122 aaKnown RBP10.53□□□□□ -0.72
HDAC3-211ENST00000491581 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
HDAC3-211ENST00000491581 B4E1Z4 1266 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 ASGR1P07306 291 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 PDHBP11177 359 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDAC3-211ENST00000491581 PSMC6P62333 389 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 BAATQ14032 418 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-211ENST00000491581 COL9A3Q14050 684 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-211ENST00000491581 RNF180Q86T96 592 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 CHST13Q8NET6 341 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 GUCD1Q96NT3 240 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
HDAC3-211ENST00000491581 ACAD9Q9H845 621 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 ZNF287Q9HBT7 754 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 STARD7Q9NQZ5 370 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 CYP39A1Q9NYL5 469 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 FAM184BQ9ULE4 1060 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 UMODL1Q5DID0 1318 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 SYNGAP1Q96PV0 1343 aa10.52□□□□□ -0.73
HDAC3-211ENST00000491581 SCN5AQ14524 2016 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 KDM4AO75164 1064 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 CLTBP09497 229 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 SMPD1P17405 629 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 SYDE2Q5VT97 1194 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 TAPT1Q6NXT6 567 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 CXCL17Q6UXB2 119 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 FAM160B2Q86V87 743 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 CLEC4DQ8WXI8 215 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-211ENST00000491581 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
HDAC3-211ENST00000491581 GRXCR1A8MXD5 290 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 DUSP11O75319 330 aaKnown RBP10.5□□□□□ -0.73
HDAC3-211ENST00000491581 ACRP10323 421 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 TOP1P11387 765 aaKnown RBP10.5□□□□□ -0.73
HDAC3-211ENST00000491581 CALML3P27482 149 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 COPB2P35606 906 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 OAZ1P54368 228 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 TNFAIP2Q03169 654 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 USH1GQ495M9 461 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 GNASQ5JWF2 1037 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
HDAC3-211ENST00000491581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDAC3-211ENST00000491581 C16orf59Q7L2K0 433 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-211ENST00000491581 CHURC1Q8WUH1 139 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 COPS5Q92905 334 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 VTI1AQ96AJ9 217 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 TTYH1Q9H313 450 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-211ENST00000491581 TMEM39AQ9NV64 488 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 PRKAG2Q9UGJ0 569 aa10.5□□□□□ -0.73
HDAC3-211ENST00000491581 CDH23Q9H251 3354 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 PTPDC1A2A3K4 754 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-211ENST00000491581 ICAM1P05362 532 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 RAG1P15918 1043 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 GJA9P57773 515 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 PTH1RQ03431 593 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 ZNF543Q08ER8 600 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 CYB5R4Q7L1T6 521 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 TLK2Q86UE8 772 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 DCAF4Q8WV16 495 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-211ENST00000491581 UPF3AQ9H1J1 476 aaKnown RBP10.49□□□□□ -0.73
HDAC3-211ENST00000491581 ABHD16BQ9H3Z7 469 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 OSBPL3Q9H4L5 887 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 DIAPH3Q9NSV4 1193 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 COL20A1Q9P218 1284 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 FBXO40Q9UH90 709 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 NRBP1Q9UHY1 535 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 SYNPO2Q9UMS6 1093 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 GNEQ9Y223 722 aaKnown RBP10.49□□□□□ -0.73
HDAC3-211ENST00000491581 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
HDAC3-211ENST00000491581 ZNF213O14771 459 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 KIAA0355O15063 1070 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 CSF2RAP15509 400 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 CYP2C18P33260 490 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 PBX2P40425 430 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 CDK7P50613 346 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 ALDH5A1P51649 535 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-211ENST00000491581 SLC35G1Q2M3R5 365 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 C1orf53Q5VUE5 145 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 BTNL9Q6UXG8 535 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 CHST3Q7LGC8 479 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 SLC17A8Q8NDX2 589 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
HDAC3-211ENST00000491581 TRPV6Q9H1D0 765 aa10.48□□□□□ -0.73
HDAC3-211ENST00000491581 VAT1LQ9HCJ6 419 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms