RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 ITGA7Q13683 1181 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 IER5LQ5T953 404 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 CNTNAP3BQ96NU0 1288 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 AP5M1Q9H0R1 490 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 CHD6Q8TD26 2715 aa13.35□□□□□ -0.27
CLCNKA-206ENST00000491433 NCOR2Q9Y618 2525 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 MED19A0JLT2 244 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ASB14A6NK59 587 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 RFXAPO00287 272 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ACTN1P12814 892 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ATP2A2P16615 1042 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ADD2P35612 726 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 SYNPO2Q9UMS6 1093 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 Q9Y3F1 56 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
CLCNKA-206ENST00000491433 MYH7P12883 1935 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 GREB1LQ9C091 1923 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 KIF28PB7ZC32 967 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 F5H6K3 240 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 ADCY6O43306 1168 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 PRKAB2O43741 272 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 CCL23P55773 120 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 KLRC3Q07444 240 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 KRT40Q6A162 431 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 TLK2Q86UE8 772 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 RHPN1Q8TCX5 695 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 ATOH1Q92858 354 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 KIF1BPQ96EK5 621 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 NOC4LQ9BVI4 516 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 MKNK2Q9HBH9 465 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 PAG1Q9NWQ8 432 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 FAM186AA6NE01 2351 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 ACACBO00763 2458 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
CLCNKA-206ENST00000491433 CTAGE5O15320 804 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 RABGGTBP53611 331 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 BEX3Q00994 111 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 LEXMQ3ZCV2 418 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 IQSEC1Q6DN90 963 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 PHOSPHO2Q8TCD6 241 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 SLC9A7Q96T83 725 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 ACAD9Q9H845 621 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 GNEQ9Y223 722 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
CLCNKA-206ENST00000491433 CYP2D7A0A087X1C5 515 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 NDUFB10O96000 172 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 RFC2P35250 354 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 TKFCQ3LXA3 575 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 SUGP1Q8IWZ8 645 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 RPAP2Q8IXW5 612 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 UBE2ZQ9H832 354 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 COG6Q9Y2V7 657 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 CFAP47Q6ZTR5 3102 aa13.31□□□□□ -0.28
CLCNKA-206ENST00000491433 BRWD1Q9NSI6 2320 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 B4GALT4O60513 344 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 MYOGP15173 224 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 IL9P15248 144 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 ACAP1Q15027 740 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 FAM133AQ8N9E0 248 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 MKL1Q969V6 931 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 FGD4Q96M96 766 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 WNT8AQ9H1J5 351 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms