RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CYP39A1Q9NYL5 469 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 CTNNA3Q9UI47 895 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 MOXD2PA6NHM9 499 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 ADCY6O43306 1168 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 C6orf222P0C671 652 aaPredicted RBP9.7□□□□□ -0.86
LSM2-213ENST00000491421 SNHG28P0DPA3 235 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 GSPT1P15170 499 aaKnown RBP9.7□□□□□ -0.86
LSM2-213ENST00000491421 ACLYP53396 1101 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 TLE2Q04725 743 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 ZNF543Q08ER8 600 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 KCNA10Q16322 511 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 LRIT3Q3SXY7 679 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 DGKHQ86XP1 1220 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 KAT14Q9H8E8 782 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 STARD7Q9NQZ5 370 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 PDLIM7Q9NR12 457 aa9.7□□□□□ -0.86
LSM2-213ENST00000491421 MYADML2A6NDP7 307 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 B4E1Z4 1266 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 NFIBO00712 420 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 ASTN1O14525 1302 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 PQBP1O60828 265 aaKnown RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 CLTBP09497 229 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 CST5P28325 142 aaPredicted RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 TNFAIP2Q03169 654 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 CCSAPQ6IQ19 270 aaPredicted RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 NOL8Q76FK4 1167 aaKnown RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 SH3RF1Q7Z6J0 888 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 PCSK9Q8NBP7 692 aaKnown RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 KLHDC9Q8NEP7 349 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 RAD50Q92878 1312 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 ZSCAN10Q96SZ4 725 aaPredicted RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 KRT23Q9C075 422 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 KATNBL1Q9H079 304 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 UPF3AQ9H1J1 476 aaKnown RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 IL25Q9H293 177 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 CNNM2Q9H8M5 875 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
LSM2-213ENST00000491421 DDX49Q9Y6V7 483 aaKnown RBP9.69□□□□□ -0.86
LSM2-213ENST00000491421 TNKSO95271 1327 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 PTPDC1A2A3K4 754 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 TRIM43BA6NCK2 446 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 ASGR1P07306 291 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 GJA9P57773 515 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 BAATQ14032 418 aaPredicted RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 GNASQ5JWF2 1037 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 EEPD1Q7L9B9 569 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 FBXO16Q8IX29 292 aaPredicted RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 ENAHQ8N8S7 591 aaPredicted RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 RUFY2Q8WXA3 655 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 BADQ92934 168 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 VTI1AQ96AJ9 217 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 TRIM43Q96BQ3 446 aaPredicted RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 GLT1D1Q96MS3 346 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 UBAC1Q9BSL1 405 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 UBA5Q9GZZ9 404 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 ZSWIM5Q9P217 1185 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 ADD3Q9UEY8 706 aaKnown RBP9.68□□□□□ -0.86
LSM2-213ENST00000491421 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
LSM2-213ENST00000491421 ELP1O95163 1332 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.67□□□□□ -0.86
LSM2-213ENST00000491421 DCDC2CA8MYV0 355 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 CHMLP26374 656 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 CALML3P27482 149 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 ALDH5A1P51649 535 aaPredicted RBP9.67□□□□□ -0.86
LSM2-213ENST00000491421 USH1GQ495M9 461 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 ASPRV1Q53RT3 343 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 SLC30A10Q6XR72 485 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 RNF207Q6ZRF8 634 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 ANKRD33Q7Z3H0 272 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 TLK2Q86UE8 772 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 MORC4Q8TE76 937 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 CLEC4DQ8WXI8 215 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 ANKS1AQ92625 1134 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 TOX2Q96NM4 488 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 AP5M1Q9H0R1 490 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 CPVLQ9H3G5 476 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 VTA1Q9NP79 307 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 PDGFCQ9NRA1 345 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 TMEM39AQ9NV64 488 aa9.67□□□□□ -0.86
LSM2-213ENST00000491421 GNEQ9Y223 722 aaKnown RBP9.67□□□□□ -0.86
LSM2-213ENST00000491421 MROH7Q68CQ1 1323 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 LOC102724159A0A0B4J2E5 919 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 A0A0U1RQG5 324 aaPredicted RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 KIAA0355O15063 1070 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 CTAGE5O15320 804 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 DYNC1LI2O43237 492 aaPredicted RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 PARP1P09874 1014 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 RAG1P15918 1043 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 SMPD1P17405 629 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 ITGB8P26012 769 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 RPS6P62753 249 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms