RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	HOMER2	Q9NSB8	354 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ZBED9	Q6R2W3	1325 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	GBF1	Q92538	1859 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	MCM3AP	O60318	1980 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	GPR37L1	O60883	481 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ACTN1	P12814	892 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	TTLL4	Q14679	1199 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ZSCAN25	Q6NSZ9	544 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	MKL1	Q969V6	931 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	BCL11A	Q9H165	835 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ACAD9	Q9H845	621 aa		23.02	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	SMPD1	P17405	629 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	PSMC6	P62333	389 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	SBK1	Q52WX2	424 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	PHOSPHO2	Q8TCD6	241 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	VWCE	Q96DN2	955 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	CERS4	Q9HA82	394 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	SYNPO2	Q9UMS6	1093 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	COG6	Q9Y2V7	657 aa		23.01	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	SOWAHB	A6NEL2	793 aa		23	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	KIF28P	B7ZC32	967 aa		23	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	RLBP1	P12271	317 aa		23	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	ATP5J	P18859	108 aa		23	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	ZNF444	Q8N0Y2	327 aa	Predicted RBP	23	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	DEFB128	Q7Z7B8	93 aa		22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	RPAP2	Q8IXW5	612 aa	Predicted RBP	22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	STK11IP	Q8N1F8	1099 aa		22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	ARNTL2	Q8WYA1	636 aa		22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	SLC9A7	Q96T83	725 aa		22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	HAUS7	Q99871	368 aa		22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	PUS7L	Q9H0K6	701 aa	Known RBP	22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	ZNF287	Q9HBT7	754 aa		22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	A1CF	Q9NQ94	594 aa	Known RBP	22.99	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	MUC6	Q6W4X9	2439 aa		22.98	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TKFC	Q3LXA3	575 aa		22.98	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	GIMAP6	Q6P9H5	292 aa		22.98	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	PDGFC	Q9NRA1	345 aa		22.98	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	MINDY4B	A8MYZ0	360 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	CYP2C9	P11712	490 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	BMP3	P12645	472 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	RFC2	P35250	354 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	KRT40	Q6A162	431 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TAPT1	Q6NXT6	567 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	GMCL1P1	Q8NEA9	526 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	CHURC1	Q8WUH1	139 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	RNF146	Q9NTX7	359 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	POLR3E	Q9NVU0	708 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	MTMR4	Q9NYA4	1195 aa		22.97	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	IGKV6D-41	A0A0C4DH26	115 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	EPOP	A6NHQ4	379 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	RAB11FIP3	O75154	756 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TTLL1	O95922	423 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	CHGB	P05060	677 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TAP1	Q03518	808 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	KIAA1211	Q6ZU35	1233 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	EEPD1	Q7L9B9	569 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TRERF1	Q96PN7	1200 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	STRBP	Q96SI9	672 aa	Known RBP	22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TRMT13	Q9NUP7	481 aa	Known RBP	22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TNKS	O95271	1327 aa		22.96	■■□□□ 1.27
CDK5RAP2-218	ENST00000491334	TMEM232	C9JQI7	657 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	HMMR	O75330	724 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	STAT2	P52630	851 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	SLFN13	Q68D06	897 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	FAM160B2	Q86V87	743 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	RETREG2	Q8NC44	543 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	CEP95	Q96GE4	821 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	VTA1	Q9NP79	307 aa		22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	ISY1	Q9ULR0	285 aa	Known RBP	22.95	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	GSG1L2	A8MUP6	293 aa		22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	PI4K2B	G5E9Z4	385 aa		22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	PTGS1	P23219	599 aa		22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	IK	Q13123	557 aa	Predicted RBP	22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	HERC6	Q8IVU3	1022 aa		22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	FTO	Q9C0B1	505 aa	Known RBP eCLIP	22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	C11orf16	Q9NQ32	467 aa		22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	GPHN	Q9NQX3	736 aa	Predicted RBP	22.94	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	ALAS1	P13196	640 aa		22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	GRB10	Q13322	594 aa		22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	DUSP28	Q4G0W2	176 aa		22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	FBXO16	Q8IX29	292 aa	Predicted RBP	22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	LRRC47	Q8N1G4	583 aa	Known RBP	22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	STAG1	Q8WVM7	1258 aa		22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	LMCD1	Q9NZU5	365 aa		22.93	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	FAM86C2P	A6NEL3	165 aa		22.92	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	ALYREF	Q86V81	257 aa	Known RBP	22.92	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	KHSRP	Q92945	711 aa	Known RBP eCLIP	22.92	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	GREB1L	Q9C091	1923 aa	Predicted RBP	22.92	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	ZNF536	O15090	1300 aa		22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	PITPNM1	O00562	1244 aa		22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	IQCF3	P0C7M6	154 aa		22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	CPT1A	P50416	773 aa		22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	PURA	Q00577	322 aa	Known RBP	22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	TMEM63B	Q5T3F8	832 aa		22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	MTG1	Q9BT17	334 aa	Predicted RBP	22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	CYP39A1	Q9NYL5	469 aa		22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	DDX49	Q9Y6V7	483 aa	Known RBP	22.91	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	PRDM1	O75626	825 aa		22.9	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	MYL3	P08590	195 aa		22.9	■■□□□ 1.26

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms