RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RALYLQ86SE5 291 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 ZKSCAN3Q9BRR0 538 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 MAF1Q9H063 256 aa19.38■□□□□ 0.69
PDLIM2-217ENST00000491330 MYH4Q9Y623 1939 aa19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 B4E1Z4 1266 aa19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 SNAP25P60880 206 aa19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 TRIM60Q495X7 471 aa19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 BRDTQ58F21 947 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 IFIT1BQ5T764 474 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 IQSEC1Q6DN90 963 aa19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 CENPQQ7L2Z9 268 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 VTA1Q9NP79 307 aa19.37■□□□□ 0.69
PDLIM2-217ENST00000491330 ELP1O95163 1332 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 NEDD4P46934 1319 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 WDR19Q8NEZ3 1342 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 SYNRGQ9UMZ2 1314 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 A0A1W2PQ45 241 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 A0A1W2PQY0 241 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 TLR3O15455 904 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 CABYRO75952 493 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 PARP1P09874 1014 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 KCNA10Q16322 511 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 LRIT3Q3SXY7 679 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 GPR153Q6NV75 609 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 RNF207Q6ZRF8 634 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 MCF2L2Q86YR7 1114 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 SEZ6LQ9BYH1 1024 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 ZSWIM5Q9P217 1185 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 CEP290O15078 2479 aa19.36■□□□□ 0.69
PDLIM2-217ENST00000491330 TNKSO95271 1327 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 ADAMTS4O75173 837 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 CLTBP09497 229 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 SNHG28P0DPA3 235 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 RAG1P15918 1043 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 CST5P28325 142 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 GJA9P57773 515 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 TLE2Q04725 743 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 BAATQ14032 418 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 SNX17Q15036 470 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 ANKS1AQ92625 1134 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 TOX2Q96NM4 488 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 Q9Y3F1 56 aa19.35■□□□□ 0.69
PDLIM2-217ENST00000491330 PQBP1O60828 265 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-217ENST00000491330 CALML3P27482 149 aa19.34■□□□□ 0.69
PDLIM2-217ENST00000491330 PDE4DQ08499 809 aa19.34■□□□□ 0.69
PDLIM2-217ENST00000491330 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
PDLIM2-217ENST00000491330 KLHDC9Q8NEP7 349 aa19.34■□□□□ 0.69
PDLIM2-217ENST00000491330 TMEM39AQ9NV64 488 aa19.34■□□□□ 0.69
PDLIM2-217ENST00000491330 PARP14Q460N5 1801 aa19.33■□□□□ 0.69
PDLIM2-217ENST00000491330 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 SOWAHBA6NEL2 793 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 ASGR1P07306 291 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 CHMLP26374 656 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 PDE4AP27815 886 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 RGS22Q8NE09 1264 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 DNERQ8NFT8 737 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 NCOA7Q8NI08 942 aa19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 GPHNQ9NQX3 736 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 MRPL11Q9Y3B7 192 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-217ENST00000491330 COL11A1P12107 1806 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 LAMA4Q16363 1823 aa19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 ABCB11O95342 1321 aa19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 GOLGA8HP0CJ92 632 aa19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 GSPT1P15170 499 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 USH1GQ495M9 461 aa19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 CASC1Q6TDU7 716 aa19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 ENAHQ8N8S7 591 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 UBA5Q9GZZ9 404 aa19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 UPF3AQ9H1J1 476 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-217ENST00000491330 IFIT3O14879 490 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 DYNC1LI2O43237 492 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 ALDH5A1P51649 535 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 EEPD1Q7L9B9 569 aa19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 ANKRD33Q7Z3H0 272 aa19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 TLK2Q86UE8 772 aa19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 LENG1Q96BZ8 264 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 BRCA2P51587 3418 aa19.31■□□□□ 0.68
PDLIM2-217ENST00000491330 NFIBO00712 420 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 NKRFO15226 690 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 NEFLP07196 543 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 CDC37Q16543 378 aaPredicted RBP19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 FSCN1Q16658 493 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 RASGRP2Q7LDG7 609 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 FBXO11Q86XK2 927 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 ADGRF4Q8IZF3 695 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 BADQ92934 168 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 FGD4Q96M96 766 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 PDLIM7Q9NR12 457 aa19.3■□□□□ 0.68
PDLIM2-217ENST00000491330 CPT1AP50416 773 aa19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 RPS6P62753 249 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 WTAPQ15007 396 aa19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 CATIPQ7Z7H3 387 aa19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 FBXO16Q8IX29 292 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 AMNQ9BXJ7 453 aa19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 WDR11Q9BZH6 1224 aa19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 POLR3EQ9NVU0 708 aa19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 MKI67P46013 3256 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-217ENST00000491330 ARVCFO00192 962 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 SGSM2O43147 1006 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms