RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-208	ENST00000491292	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	CAPN6	Q9Y6Q1	641 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	NCAPD2	Q15021	1401 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	RTL9	Q8NET4	1388 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	RCCD1	A6NED2	376 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	WNT7A	O00755	349 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	BUB1B	O60566	1050 aa	Predicted RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	TCP1	P17987	556 aa	Known RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	MAP2K1	Q02750	393 aa	Predicted RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	GFPT1	Q06210	699 aa	Predicted RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	DZIP3	Q86Y13	1208 aa	Known RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	TSEN2	Q8NCE0	465 aa	Known RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	AP1M1	Q9BXS5	423 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	VIPAS39	Q9H9C1	493 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	RBM12	Q9NTZ6	932 aa	Known RBP	10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	RFX7	Q2KHR2	1363 aa		10.89	□□□□□ -0.67
ERCC3-208	ENST00000491292	PXDN	Q92626	1479 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	BICDL2	A1A5D9	508 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	CCNT1	O60563	726 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	CIAO1	O76071	339 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PDE8B	O95263	885 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	GOLGA8H	P0CJ92	632 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	TEC	P42680	631 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PMS1	P54277	932 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	HDLBP	Q00341	1268 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	RASGRF1	Q13972	1273 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	ARFGAP2	Q8N6H7	521 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	ZNF579	Q8NAF0	562 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	LIMA1	Q9UHB6	759 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	XDH	P47989	1333 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	MEFV	O15553	781 aa	Predicted RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	TMOD1	P28289	359 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	IFNAR2	P48551	515 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	ZBED6	P86452	979 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	CDKAL1	Q5VV42	579 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	CPVL	Q9H3G5	476 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PLAA	Q9Y263	795 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PREX1	Q8TCU6	1659 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	FOXP2	O15409	715 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PUM3	Q15397	648 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	TSG101	Q99816	390 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PYM1	Q9BRP8	204 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	NUP58	Q9BVL2	599 aa		10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	NOVA2	Q9UNW9	492 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	REXO2	Q9Y3B8	237 aa	Known RBP	10.88	□□□□□ -0.67
ERCC3-208	ENST00000491292	PSMD14	O00487	310 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	FCER1A	P12319	257 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	SCP2	P22307	547 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	GYG1	P46976	350 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	NAPA	P54920	295 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	TNNC1	P63316	161 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	NEDD9	Q14511	834 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	LLGL1	Q15334	1064 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	CABP7	Q86V35	215 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	SGMS1	Q86VZ5	419 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	CCDC25	Q86WR0	208 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	MGARP	Q8TDB4	240 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	CCT8L2	Q96SF2	557 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	RNF26	Q9BY78	433 aa	Predicted RBP	10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	GOLPH3	Q9H4A6	298 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	PEAK1	Q9H792	1746 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	GSG1L2	A8MUP6	293 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	LSP1	P33241	339 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	SNCB	Q16143	134 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	KIAA0753	Q2KHM9	967 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	LPIN2	Q92539	896 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	KLC4	Q9NSK0	619 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	SNX12	Q9UMY4	172 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	ITSN1	Q15811	1721 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	POLR2F	P61218	127 aa	Known RBP	10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	AMPD3	Q01432	767 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	NLRP14	Q86W24	1093 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	CACNA2D3	Q8IZS8	1091 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	HAUS2	Q9NVX0	235 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	MCM9	Q9NXL9	1143 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	GGT7	Q9UJ14	662 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	STK38L	Q9Y2H1	464 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	SCG2	P13521	617 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	KIF5B	P33176	963 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	HLF	Q16534	295 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	ZNF473	Q8WTR7	871 aa	Known RBP	10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	CEP89	Q96ST8	783 aa		10.87	□□□□□ -0.67
ERCC3-208	ENST00000491292	AGL	P35573	1532 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	SEMA3E	O15041	775 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	CHUK	O15111	745 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	FAM153B	P0C7A2	387 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	FAM153C	Q494X1	144 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	FAM133B	Q5BKY9	247 aa	Known RBP	10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	DNAAF5	Q86Y56	855 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	MICAL1	Q8TDZ2	1067 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	P2RX5	Q93086	422 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	FAM153A	Q9UHL3	310 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	CEP83	Q9Y592	693 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292		A0A1B0GUA9	196 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	LRRC53	A6NM62	1247 aa		10.86	□□□□□ -0.67
ERCC3-208	ENST00000491292	SKAP2	O75563	359 aa	Predicted RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms