RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ECE2O60344 883 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 BMP3P12645 472 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 HERC4Q5GLZ8 1057 aaPredicted RBP8.18□□□□□ -1.1
NPHP3-208ENST00000490993 DYMQ7RTS9 669 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 MCF2L2Q86YR7 1114 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 TMX1Q9H3N1 280 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 RIC8AQ9NPQ8 531 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 PPP2R2CQ9Y2T4 447 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 RASA1P20936 1047 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 KLRK1P26718 216 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 ODF2Q5BJF6 829 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 KRT26Q7Z3Y9 468 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 ADGRA1Q86SQ6 560 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 GRAMD1CQ8IYS0 662 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 SLC44A5Q8NCS7 719 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 PICK1Q9NRD5 415 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 SYDE2Q5VT97 1194 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 RCSD1Q6JBY9 416 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 METTL16Q86W50 562 aaKnown RBP8.18□□□□□ -1.1
NPHP3-208ENST00000490993 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 LMBR1Q8WVP7 490 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 P2RX5Q93086 422 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 PANX2Q96RD6 677 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 NAPGQ99747 312 aaPredicted RBP8.18□□□□□ -1.1
NPHP3-208ENST00000490993 AS3MTQ9HBK9 375 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 JADE2Q9NQC1 790 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 PCDHA6Q9UN73 950 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 PCDHA8Q9Y5H6 950 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 BCL9LQ86UU0 1499 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 COL18A1P39060 1754 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 TCP10L2B9ZVM9 353 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 SLC26A4O43511 780 aa8.18□□□□□ -1.1
NPHP3-208ENST00000490993 ADKP55263 362 aaKnown RBP8.18□□□□□ -1.1
NPHP3-208ENST00000490993 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
NPHP3-208ENST00000490993 HDLBPQ00341 1268 aaKnown RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 KCTD1Q719H9 257 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 COA7Q96BR5 231 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 PANK4Q9NVE7 773 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 MTMR4Q9NYA4 1195 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 HPSEQ9Y251 543 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 N4BP2Q86UW6 1770 aaPredicted RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CFBP00751 764 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 RDXP35241 583 aaKnown RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CCDC122Q5T0U0 273 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 DCAF15Q66K64 600 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 GPBP1Q86WP2 473 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 ANKS1AQ92625 1134 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 PPP1R13BQ96KQ4 1090 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CCDC94Q9BW85 323 aaPredicted RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 GUCA1BQ9UMX6 200 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 FRMD4BQ9Y2L6 1034 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 A0A087WWV3 80 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CCNE1P24864 410 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 KCNJ6P48051 423 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 PRR16Q569H4 304 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 ARFGAP3Q9NP61 516 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CWC15Q9P013 229 aaKnown RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CCDC66A2RUB6 948 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 PLCG1P19174 1290 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 HOXA10P31260 410 aaPredicted RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 MATR3P43243 847 aaKnown RBP eCLIP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 PPP2R3AQ06190 1150 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CDC37Q16543 378 aaPredicted RBP8.17□□□□□ -1.1
NPHP3-208ENST00000490993 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 CCSER1Q9C0I3 900 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 NBPF3Q9H094 633 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 PHLPP2Q6ZVD8 1323 aa8.17□□□□□ -1.1
NPHP3-208ENST00000490993 ESYT2A0FGR8 921 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 KMT5BQ4FZB7 885 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 KIFC2Q96AC6 838 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 CRACR2AQ9BSW2 395 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 RTFDC1Q9BY42 306 aaPredicted RBP8.16□□□□□ -1.1
NPHP3-208ENST00000490993 TMOD4Q9NZQ9 345 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 SLIT2O94813 1529 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 ARHGEF35A5YM69 484 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 KCNB1Q14721 858 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 FAM26FQ5R3K3 315 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 CCDC174Q6PII3 467 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
NPHP3-208ENST00000490993 SAMSN1Q9NSI8 373 aaKnown RBP8.16□□□□□ -1.1
NPHP3-208ENST00000490993 MYO1AQ9UBC5 1043 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 FAM205AQ6ZU69 1335 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 PVALEFA0A1B0GWK0 134 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 GOLGA6L10A6NI86 522 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 GAS7O60861 476 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 STAT2P52630 851 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 SLC9C1Q4G0N8 1177 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 JAKMIP2Q96AA8 810 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 KCNG1Q9UIX4 513 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 EXOC7Q9UPT5 735 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 STXBP3O00186 592 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 ENTPD3O75355 529 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 ATP1A3P13637 1013 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 GOLGA5Q8TBA6 731 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms