RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PHKA1P46020 1223 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 ATP2C1P98194 919 aaPredicted RBP21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 PTGDRQ13258 359 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 SF3B2Q13435 895 aaKnown RBP21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 PKN1Q16512 942 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 TTC38Q5R3I4 469 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 LRRC1Q9BTT6 524 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 ARMT1Q9H993 441 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 PDS5AQ29RF7 1337 aaKnown RBP21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 MACROD2A1Z1Q3 448 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 TRIM49BA6NDI0 452 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 GSG1L2A8MUP6 293 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 B4GALNT4Q76KP1 1039 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 CREG2Q8IUH2 290 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 PROM2Q8N271 834 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 CAPN7Q9Y6W3 813 aa21.58■■□□□ 1.05
SNAPC3-206ENST00000490969 SCN7AQ01118 1682 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 NDUFAB1O14561 156 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 PRDM1O75626 825 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 MMP14P50281 582 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 TTMPQ5BVD1 217 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 ARL8AQ96BM9 186 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 NHEJ1Q9H9Q4 299 aaPredicted RBP21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 SNX12Q9UMY4 172 aa21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 IQSEC3Q9UPP2 1182 aaPredicted RBP21.58■■□□□ 1.04
SNAPC3-206ENST00000490969 A6NNZ2 444 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 EEF1GP26641 437 aaKnown RBP21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 TUBB8Q3ZCM7 444 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 SECISBP2LQ93073 1101 aaKnown RBP21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 PYM1Q9BRP8 204 aaKnown RBP21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 MTA3Q9BTC8 594 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 ZNHIT6Q9NWK9 470 aaKnown RBP21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 ZPR1O75312 459 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 PDE8BO95263 885 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 ARID4AP29374 1257 aaPredicted RBP21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 ITIH3Q06033 890 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 ALS2CLQ60I27 953 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 SLC51AQ86UW1 340 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 CCDC170Q8IYT3 715 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 MAGEB6Q8N7X4 407 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 TSEN2Q8NCE0 465 aaKnown RBP21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 RUFY1Q96T51 708 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 AGPAT5Q9NUQ2 364 aa21.57■■□□□ 1.04
SNAPC3-206ENST00000490969 hCG_1642624A0A1W2PR95 340 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 PRKAB2O43741 272 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 TDO2P48775 406 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 EPHB4P54760 987 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 PPARAQ07869 468 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 PDCLQ13371 301 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 ZNF572Q7Z3I7 529 aaPredicted RBP21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 FNTAP49354 379 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 CYP27A1Q02318 531 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 KIF5AQ12840 1032 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 ADSSL1Q8N142 457 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 CABS1Q96KC9 395 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 TTYH3Q9C0H2 523 aa21.56■■□□□ 1.04
SNAPC3-206ENST00000490969 CASZ1Q86V15 1759 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 MYH2Q9UKX2 1941 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 KIAA0754O94854 1291 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 EMBQ6PCB8 327 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 TNFRSF25Q93038 417 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 UBAC1Q9BSL1 405 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 HSF2BPO75031 334 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 UQCRFS1P1P0C7P4 283 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 DNM2P50570 870 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 PMS1P54277 932 aaKnown RBP21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 CCDC152Q4G0S7 254 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 OTUD6BQ8N6M0 293 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 SPATA4Q8NEY3 305 aa21.55■■□□□ 1.04
SNAPC3-206ENST00000490969 LRP5O75197 1615 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 FSBPO95073 299 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 SRGNP10124 158 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 TRIM21P19474 475 aaKnown RBP21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 VAV2P52735 878 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 MRPS25P82663 173 aaKnown RBP21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 SETQ01105 290 aaPredicted RBP21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 SLC7A5Q01650 507 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 SPATS2Q86XZ4 545 aaKnown RBP21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 TSGA10Q9BZW7 698 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 THAP9Q9H5L6 903 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 B4DLN1 442 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 H0YHG0 523 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 MYO1FO00160 1098 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 MEFVO15553 781 aaPredicted RBP21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 PPP2R5BQ15173 497 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 TRIM58Q8NG06 486 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 SETDB2Q96T68 719 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 NACAP1Q9BZK3 213 aa21.54■■□□□ 1.04
SNAPC3-206ENST00000490969 GOLGB1Q14789 3259 aaKnown RBP21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 RTL9Q8NET4 1388 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 PRPF3O43395 683 aaKnown RBP21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 FUT2Q10981 343 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 MAP3K12Q12852 859 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 IL17AQ16552 155 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 TRAPPC3LQ5T215 181 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 SMCR8Q8TEV9 937 aaPredicted RBP21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 CAVIN3Q969G5 261 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 MAGEC2Q9UBF1 373 aaPredicted RBP21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 V9GY48 417 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms