RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LHX8Q68G74 356 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 MAMDC4Q6UXC1 1216 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 ZNF654Q8IZM8 581 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 TMTC2Q8N394 836 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 CLEC4DQ8WXI8 215 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 MTMR8Q96EF0 704 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 NRBP1Q9UHY1 535 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 OGDHLQ9ULD0 1010 aa17.93■□□□□ 0.46
VPS26A-207ENST00000490696 NFIBO00712 420 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 DDAH1O94760 285 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 CNTN2Q02246 1040 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 QRICH1Q2TAL8 776 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 PRAMEF19Q5SWL8 479 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
VPS26A-207ENST00000490696 SGMS1Q86VZ5 419 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 MAP3K14Q99558 947 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 MYL10Q9BUA6 226 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 CYP39A1Q9NYL5 469 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 SNX14Q9Y5W7 946 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 SYNGAP1Q96PV0 1343 aa17.92■□□□□ 0.46
VPS26A-207ENST00000490696 POTEB2H3BUK9 544 aa17.91■□□□□ 0.46
VPS26A-207ENST00000490696 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
VPS26A-207ENST00000490696 FARP2O94887 1054 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-207ENST00000490696 SNAI1O95863 264 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-207ENST00000490696 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-207ENST00000490696 NSMFQ6X4W1 530 aa17.91■□□□□ 0.46
VPS26A-207ENST00000490696 NUP133Q8WUM0 1156 aa17.91■□□□□ 0.46
VPS26A-207ENST00000490696 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
VPS26A-207ENST00000490696 USP26Q9BXU7 913 aa17.91■□□□□ 0.46
VPS26A-207ENST00000490696 RIOX1Q9H6W3 641 aa17.91■□□□□ 0.46
VPS26A-207ENST00000490696 DDX20Q9UHI6 824 aaKnown RBP17.91■□□□□ 0.46
VPS26A-207ENST00000490696 BAZ2BQ9UIF8 2168 aaKnown RBP17.91■□□□□ 0.46
VPS26A-207ENST00000490696 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 CCDC69A6NI79 296 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 SEPT4O43236 478 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 CYTH3O43739 400 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 MSCO60682 206 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 HMGB1P09429 215 aaKnown RBP17.9■□□□□ 0.46
VPS26A-207ENST00000490696 CNGA1P29973 690 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 BAATQ14032 418 aaPredicted RBP17.9■□□□□ 0.46
VPS26A-207ENST00000490696 USH1GQ495M9 461 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 NFXL1Q6ZNB6 911 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 ANKLE1Q8NAG6 615 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 ASTN1O14525 1302 aa17.9■□□□□ 0.46
VPS26A-207ENST00000490696 ZBTB5O15062 677 aa17.89■□□□□ 0.45
VPS26A-207ENST00000490696 ZNF865P0CJ78 1059 aaPredicted RBP17.89■□□□□ 0.45
VPS26A-207ENST00000490696 ARMCX2Q7L311 632 aa17.89■□□□□ 0.45
VPS26A-207ENST00000490696 FBXO11Q86XK2 927 aa17.89■□□□□ 0.45
VPS26A-207ENST00000490696 JAKMIP1Q96N16 626 aaKnown RBP17.89■□□□□ 0.45
VPS26A-207ENST00000490696 PURBQ96QR8 312 aaKnown RBP17.89■□□□□ 0.45
VPS26A-207ENST00000490696 SLC12A7Q9Y666 1083 aa17.89■□□□□ 0.45
VPS26A-207ENST00000490696 LCTP09848 1927 aa17.89■□□□□ 0.45
VPS26A-207ENST00000490696 ABCB11O95342 1321 aa17.89■□□□□ 0.45
VPS26A-207ENST00000490696 MCM3APO60318 1980 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 PTPDC1A2A3K4 754 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 PPP1R11O60927 126 aaPredicted RBP17.88■□□□□ 0.45
VPS26A-207ENST00000490696 KIF5BP33176 963 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 SLC30A10Q6XR72 485 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 RNF207Q6ZRF8 634 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 CCDC144CPQ8IYA2 1237 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
VPS26A-207ENST00000490696 DIS3LQ8TF46 1054 aaKnown RBP17.88■□□□□ 0.45
VPS26A-207ENST00000490696 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.88■□□□□ 0.45
VPS26A-207ENST00000490696 CNPY2Q9Y2B0 182 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 FRMPD3Q5JV73 1810 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 MYH6P13533 1939 aa17.88■□□□□ 0.45
VPS26A-207ENST00000490696 CALM1P0DP23 149 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 CALM2P0DP24 149 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 CALM3P0DP25 149 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 CPA1P15085 419 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 RXRAP19793 462 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 RPS6P62753 249 aaKnown RBP17.87■□□□□ 0.45
VPS26A-207ENST00000490696 PAWRQ96IZ0 340 aaKnown RBP17.87■□□□□ 0.45
VPS26A-207ENST00000490696 PIGSQ96S52 555 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 SPZ1Q9BXG8 430 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 AMNQ9BXJ7 453 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 KATNBL1Q9H079 304 aa17.87■□□□□ 0.45
VPS26A-207ENST00000490696 ASB14A6NK59 587 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 SMARCA1P28370 1054 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 GNAQP50148 359 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 ANO1Q5XXA6 986 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 APOA5Q6Q788 366 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 BLOC1S2Q6QNY1 142 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 HOMER1Q86YM7 354 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 RAB11FIP4Q86YS3 637 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 FANCBQ8NB91 859 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 MORC4Q8TE76 937 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 LZTS2Q9BRK4 669 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 MAF1Q9H063 256 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 ABHD16BQ9H3Z7 469 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
VPS26A-207ENST00000490696 MRPL11Q9Y3B7 192 aaKnown RBP17.86■□□□□ 0.45
VPS26A-207ENST00000490696 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
VPS26A-207ENST00000490696 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
VPS26A-207ENST00000490696 OPLAHO14841 1288 aa17.85■□□□□ 0.45
VPS26A-207ENST00000490696 PLEKHA8P1O95397 391 aa17.85■□□□□ 0.45
VPS26A-207ENST00000490696 AKR1A1P14550 325 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms