RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
SNX12-205ENST00000490561 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
SNX12-205ENST00000490561 PCDHA4Q9UN74 947 aa15.22■□□□□ 0.03
SNX12-205ENST00000490561 SMCO2A6NFE2 343 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 IGF2BP3O00425 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNX12-205ENST00000490561 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
SNX12-205ENST00000490561 SNAP25P60880 206 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 GRM1Q13255 1194 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 TAF1CQ15572 869 aaPredicted RBP15.21■□□□□ 0.03
SNX12-205ENST00000490561 USH1GQ495M9 461 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
SNX12-205ENST00000490561 RIOX2Q8IUF8 465 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 CHST13Q8NET6 341 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 FOXP1Q9H334 677 aaPredicted RBP15.21■□□□□ 0.03
SNX12-205ENST00000490561 ZFYVE28Q9HCC9 887 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
SNX12-205ENST00000490561 MTMR6Q9Y217 621 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 ATP6V1DQ9Y5K8 247 aa15.21■□□□□ 0.03
SNX12-205ENST00000490561 DTNBO60941 627 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 BRD1O95696 1058 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 CYP2C8P10632 490 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 ALAS1P13196 640 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 HSPA6P17066 643 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 FOSBP53539 338 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 C1QTNF8P60827 252 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 PLS1Q14651 629 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 BLIDQ8IZY5 108 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 SHCBP1Q8NEM2 672 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 AGBL1Q96MI9 1066 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 PAGR1Q9BTK6 254 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 PSTPIP2Q9H939 334 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 KCNJ14Q9UNX9 436 aa15.2■□□□□ 0.02
SNX12-205ENST00000490561 PIK3CDO00329 1044 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 ERVK-9P63128 1117 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 ERVK-24P63145 666 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 GUCY1B3Q02153 619 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 MCTP1Q6DN14 999 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 TYW1BQ6NUM6 668 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
SNX12-205ENST00000490561 REXO1Q8N1G1 1221 aaKnown RBP15.19■□□□□ 0.02
SNX12-205ENST00000490561 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 MROH8Q9H579 483 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 ACAD9Q9H845 621 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 RNF146Q9NTX7 359 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
SNX12-205ENST00000490561 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
SNX12-205ENST00000490561 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
SNX12-205ENST00000490561 CA12O43570 354 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 CNMDO75829 334 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 F13A1P00488 732 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 FOSP01100 380 aaPredicted RBP15.18■□□□□ 0.02
SNX12-205ENST00000490561 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 U2AF2P26368 475 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNX12-205ENST00000490561 VEGFBP49765 207 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 GHRHRQ02643 423 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 AP3B2Q13367 1082 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNX12-205ENST00000490561 KRT25Q7Z3Z0 450 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 EHMT1Q9H9B1 1298 aa15.18■□□□□ 0.02
SNX12-205ENST00000490561 ADGRA2Q96PE1 1338 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 THSD7BQ9C0I4 1608 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 TLR2O60603 784 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 AOC2O75106 756 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 NOSTRINQ8IVI9 506 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 SHISA4Q96DD7 197 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 CFHR5Q9BXR6 569 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 MOV10L1Q9BXT6 1211 aaKnown RBP15.17■□□□□ 0.02
SNX12-205ENST00000490561 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 PFASO15067 1338 aa15.17■□□□□ 0.02
SNX12-205ENST00000490561 CCDC194A0A1B0GVG4 234 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 RESTQ13127 1097 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 NPY5RQ15761 445 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
SNX12-205ENST00000490561 CLEC4DQ8WXI8 215 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 TXNRD2Q9NNW7 524 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 HOMER2Q9NSB8 354 aa15.16■□□□□ 0.02
SNX12-205ENST00000490561 NOL7Q9UMY1 257 aaKnown RBP15.16■□□□□ 0.02
SNX12-205ENST00000490561 COL11A1P12107 1806 aaPredicted RBP15.15■□□□□ 0.02
SNX12-205ENST00000490561 SPDYE3A6NKU9 549 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 BTBD18B2RXH4 712 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 CFBP00751 764 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 BCRP11274 1271 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 MAPK4P31152 587 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 TRAPPC10P48553 1259 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 CLK2P49760 499 aaKnown RBP15.15■□□□□ 0.02
SNX12-205ENST00000490561 HSD17B4P51659 736 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 ZIC5Q96T25 663 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms