RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RFC2P35250 354 aa16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 ZP2Q05996 745 aa16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 PPP1R13LQ8WUF5 828 aa16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 CCDC8Q9H0W5 538 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 PDGFCQ9NRA1 345 aa16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 KCNJ6P48051 423 aa16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 CDK8P49336 464 aa16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 PUS10Q3MIT2 529 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 ZBED2Q9BTP6 218 aa16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
EXOSC3-207ENST00000490516 CYP2D7A0A087X1C5 515 aa16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 ATP2A1O14983 1001 aa16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 PTPN5P54829 565 aa16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 ERVK-21P61565 698 aa16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 DEFB103AP81534 67 aa16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 OS9Q13438 667 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 TGS1Q96RS0 853 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-207ENST00000490516 GREB1LQ9C091 1923 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-207ENST00000490516 KMT2EQ8IZD2 1858 aa16.52■□□□□ 0.23
EXOSC3-207ENST00000490516 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 SOWAHBA6NEL2 793 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 E9PSI1 815 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 RBAK-RBAKDNI3L0D1 243 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 GFRA3O60609 400 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 ZBED4O75132 1171 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 BAIAP3O94812 1187 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 GNAI2P04899 355 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 IRS1P35568 1242 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 EEPD1Q7L9B9 569 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 FAM9BQ8IZU0 186 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 LCORLQ8N3X6 602 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 HOMER2Q9NSB8 354 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 FBXO40Q9UH90 709 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 SCN10AQ9Y5Y9 1956 aa16.51■□□□□ 0.23
EXOSC3-207ENST00000490516 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 PITPNM1O00562 1244 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 TCF15Q12870 199 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 FAM47CQ5HY64 1035 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 ADHFE1Q8IWW8 467 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 FBXO16Q8IX29 292 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 CHST13Q8NET6 341 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 KIFC2Q96AC6 838 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 FAM86C1Q9NVL1 165 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 LCTP09848 1927 aa16.5■□□□□ 0.23
EXOSC3-207ENST00000490516 PRKAB2O43741 272 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 PDE6AP16499 860 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 PURAQ00577 322 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 IQSEC1Q6DN90 963 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 SLC38A10Q9HBR0 1119 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 PRKAG3Q9UGI9 489 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 Q9Y3F1 56 aa16.49■□□□□ 0.23
EXOSC3-207ENST00000490516 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 ASB14A6NK59 587 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 MYL3P08590 195 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 NBPF20Q3BBV1 942 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 RAD9AQ99638 391 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 PLXNA3P51805 1871 aa16.48■□□□□ 0.23
EXOSC3-207ENST00000490516 ATG2AQ2TAZ0 1938 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 F5H6K3 240 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 SURF6O75683 361 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 GJB5O95377 273 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 NDUFB10O96000 172 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 KLRC3Q07444 240 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 POLA2Q14181 598 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 GPNMBQ14956 572 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 C12orf60Q5U649 245 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 FAM117BQ6P1L5 589 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 C17orf80Q9BSJ5 609 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
EXOSC3-207ENST00000490516 BFSP2Q13515 415 aa16.46■□□□□ 0.23
EXOSC3-207ENST00000490516 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
EXOSC3-207ENST00000490516 MRPL38Q96DV4 380 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-207ENST00000490516 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms