RNA–Protein interactions for RNA: ENST00000490419.1

HOXB6-204, Transcript of homeobox B6, humanhuman

TSL 3

Gene HOXB6, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-204ENST00000490419 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 FANCBQ8NB91 859 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 BRF1Q92994 677 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 MTMR8Q96EF0 704 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 RNF208Q9H0X6 261 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 RIOX1Q9H6W3 641 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 A1CFQ9NQ94 594 aaKnown RBP11.86□□□□□ -0.51
HOXB6-204ENST00000490419 FLRT1Q9NZU1 646 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
HOXB6-204ENST00000490419 MCM3APO60318 1980 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 LCTP09848 1927 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 ABCB11O95342 1321 aa11.86□□□□□ -0.51
HOXB6-204ENST00000490419 DNAJC25-GNG10A0A024R161 153 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 ZBTB5O15062 677 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 CYTH3O43739 400 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
HOXB6-204ENST00000490419 RCAN1P53805 252 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
HOXB6-204ENST00000490419 APOBRQ0VD83 1088 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 FBXL16Q8N461 479 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 PIGSQ96S52 555 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 AGXT2Q9BYV1 514 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.85□□□□□ -0.51
HOXB6-204ENST00000490419 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
HOXB6-204ENST00000490419 RBM28Q9NW13 759 aaKnown RBP11.85□□□□□ -0.51
HOXB6-204ENST00000490419 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 RPTORQ8N122 1335 aa11.85□□□□□ -0.51
HOXB6-204ENST00000490419 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 PTPDC1A2A3K4 754 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 NFIBO00712 420 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 PLEKHA8P1O95397 391 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 GJB1P08034 283 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 CYP2C19P33261 490 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 PPP2R5BQ15173 497 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 RTN1Q16799 776 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 SLC35G1Q2M3R5 365 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 SRBD1Q8N5C6 995 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 CLEC4DQ8WXI8 215 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 TINF2Q9BSI4 451 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 PDRG1Q9NUG6 133 aa11.84□□□□□ -0.51
HOXB6-204ENST00000490419 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
HOXB6-204ENST00000490419 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.51
HOXB6-204ENST00000490419 CCDC196A0A1B0GTZ2 297 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 IGHA2P01877 340 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.52
HOXB6-204ENST00000490419 CNTN2Q02246 1040 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
HOXB6-204ENST00000490419 RNF207Q6ZRF8 634 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
HOXB6-204ENST00000490419 FAM133AQ8N9E0 248 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 MAF1Q9H063 256 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 PAK6Q9NQU5 681 aaPredicted RBP11.83□□□□□ -0.52
HOXB6-204ENST00000490419 PCDHA1Q9Y5I3 950 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 SYNGAP1Q96PV0 1343 aa11.83□□□□□ -0.52
HOXB6-204ENST00000490419 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
HOXB6-204ENST00000490419 CALML3P27482 149 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 CNGA1P29973 690 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 CCND3P30281 292 aaPredicted RBP11.82□□□□□ -0.52
HOXB6-204ENST00000490419 GJA8P48165 433 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 RPS6P62753 249 aaKnown RBP11.82□□□□□ -0.52
HOXB6-204ENST00000490419 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
HOXB6-204ENST00000490419 MAMDC4Q6UXC1 1216 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 CCDC82Q8N4S0 544 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 FGD4Q96M96 766 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 DEFB118Q96PH6 123 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 ADD3Q9UEY8 706 aaKnown RBP11.82□□□□□ -0.52
HOXB6-204ENST00000490419 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
HOXB6-204ENST00000490419 NID2Q14112 1375 aa11.81□□□□□ -0.52
HOXB6-204ENST00000490419 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
HOXB6-204ENST00000490419 ASB14A6NK59 587 aa11.81□□□□□ -0.52
HOXB6-204ENST00000490419 SGPL1O95470 568 aa11.81□□□□□ -0.52
HOXB6-204ENST00000490419 CYBAP13498 195 aa11.81□□□□□ -0.52
HOXB6-204ENST00000490419 CAPN2P17655 700 aa11.81□□□□□ -0.52
HOXB6-204ENST00000490419 EN2P19622 333 aaPredicted RBP11.81□□□□□ -0.52
HOXB6-204ENST00000490419 EVCP57679 992 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms