RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SOWAHBA6NEL2 793 aa20.38■□□□□ 0.85
SEC13-218ENST00000490283 IFIT3O14879 490 aaKnown RBP20.38■□□□□ 0.85
SEC13-218ENST00000490283 BAATQ14032 418 aaPredicted RBP20.38■□□□□ 0.85
SEC13-218ENST00000490283 CCDC144BQ3MJ40 725 aa20.38■□□□□ 0.85
SEC13-218ENST00000490283 SLC39A5Q6ZMH5 540 aa20.38■□□□□ 0.85
SEC13-218ENST00000490283 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
SEC13-218ENST00000490283 MAP4K1Q92918 833 aa20.38■□□□□ 0.85
SEC13-218ENST00000490283 FERMT2Q96AC1 680 aa20.38■□□□□ 0.85
SEC13-218ENST00000490283 LENG1Q96BZ8 264 aaPredicted RBP20.38■□□□□ 0.85
SEC13-218ENST00000490283 PHF24Q9UPV7 400 aa20.38■□□□□ 0.85
SEC13-218ENST00000490283 SYNRGQ9UMZ2 1314 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 E7EWF7 191 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 NFIBO00712 420 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 CDC37Q16543 378 aaPredicted RBP20.37■□□□□ 0.85
SEC13-218ENST00000490283 USH1GQ495M9 461 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 BMP2KLQ5H9B9 411 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 NUP133Q8WUM0 1156 aa20.37■□□□□ 0.85
SEC13-218ENST00000490283 TSEN34Q9BSV6 310 aaKnown RBP20.37■□□□□ 0.85
SEC13-218ENST00000490283 RBM8AQ9Y5S9 174 aaKnown RBP20.37■□□□□ 0.85
SEC13-218ENST00000490283 ALPK3Q96L96 1907 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 LOC102724159A0A0B4J2E5 919 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 B4DLN1 442 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 ADAMTS4O75173 837 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 NEFLP07196 543 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 C6orf222P0C671 652 aaPredicted RBP20.36■□□□□ 0.85
SEC13-218ENST00000490283 CALML3P27482 149 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 MRPL12P52815 198 aaKnown RBP20.36■□□□□ 0.85
SEC13-218ENST00000490283 PWP2Q15269 919 aaKnown RBP20.36■□□□□ 0.85
SEC13-218ENST00000490283 ADGRF4Q8IZF3 695 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 PCSK9Q8NBP7 692 aaKnown RBP20.36■□□□□ 0.85
SEC13-218ENST00000490283 CCDC136Q96JN2 1154 aa20.36■□□□□ 0.85
SEC13-218ENST00000490283 LBHD1Q9BQE6 289 aaPredicted RBP20.36■□□□□ 0.85
SEC13-218ENST00000490283 MOXD2PA6NHM9 499 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 MAGEA10P43363 369 aaPredicted RBP20.35■□□□□ 0.85
SEC13-218ENST00000490283 TNFAIP2Q03169 654 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 WTAPQ15007 396 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 SEC23AQ15436 765 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 GDF15Q99988 308 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 ESYT1Q9BSJ8 1104 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 PRO3102Q9H379 93 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 CPVLQ9H3G5 476 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 VTA1Q9NP79 307 aa20.35■□□□□ 0.85
SEC13-218ENST00000490283 ABCB11O95342 1321 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 A0A1W2PQ45 241 aaPredicted RBP20.34■□□□□ 0.85
SEC13-218ENST00000490283 A0A1W2PQY0 241 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 BMP8BP34820 402 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 FXR1P51114 621 aaKnown RBP eCLIP20.34■□□□□ 0.85
SEC13-218ENST00000490283 ALDH5A1P51649 535 aaPredicted RBP20.34■□□□□ 0.85
SEC13-218ENST00000490283 ACLYP53396 1101 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 SNX17Q15036 470 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 TRIM60Q495X7 471 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 C1orf53Q5VUE5 145 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 SLC30A10Q6XR72 485 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 CLEC4DQ8WXI8 215 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 UBE2OQ9C0C9 1292 aaKnown RBP20.34■□□□□ 0.85
SEC13-218ENST00000490283 MAF1Q9H063 256 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 AP5M1Q9H0R1 490 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 VAT1LQ9HCJ6 419 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 ANO2Q9NQ90 1003 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
SEC13-218ENST00000490283 STARD7Q9NQZ5 370 aa20.34■□□□□ 0.85
SEC13-218ENST00000490283 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 CST5P28325 142 aaPredicted RBP20.33■□□□□ 0.85
SEC13-218ENST00000490283 GJA9P57773 515 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 KCNA10Q16322 511 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 TMEM67Q5HYA8 995 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 EEPD1Q7L9B9 569 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 CATIPQ7Z7H3 387 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 MCF2L2Q86YR7 1114 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 FBXO16Q8IX29 292 aaPredicted RBP20.33■□□□□ 0.85
SEC13-218ENST00000490283 KLHDC9Q8NEP7 349 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 GLT1D1Q96MS3 346 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 KATNBL1Q9H079 304 aa20.33■□□□□ 0.85
SEC13-218ENST00000490283 MRPL11Q9Y3B7 192 aaKnown RBP20.33■□□□□ 0.85
SEC13-218ENST00000490283 RPS6P62753 249 aaKnown RBP20.32■□□□□ 0.84
SEC13-218ENST00000490283 PDE4DQ08499 809 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 GNASQ5JWF2 1037 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 IQSEC1Q6DN90 963 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 RGS22Q8NE09 1264 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 DNERQ8NFT8 737 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 MORC4Q8TE76 937 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 VTI1AQ96AJ9 217 aa20.32■□□□□ 0.84
SEC13-218ENST00000490283 PURBQ96QR8 312 aaKnown RBP20.32■□□□□ 0.84
SEC13-218ENST00000490283 LSG1Q9H089 658 aaKnown RBP20.32■□□□□ 0.84
SEC13-218ENST00000490283 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
SEC13-218ENST00000490283 ASTN1O14525 1302 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 ZEB2O60315 1214 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 MDM2Q00987 491 aaPredicted RBP20.31■□□□□ 0.84
SEC13-218ENST00000490283 TRAF1Q13077 416 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 STOX1Q6ZVD7 989 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 CHST3Q7LGC8 479 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 STAG2Q8N3U4 1231 aa20.31■□□□□ 0.84
SEC13-218ENST00000490283 AMNQ9BXJ7 453 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms