RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GMNCA6NCL1 334 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 RASSF10A6NK89 507 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 SFI1A8K8P3 1242 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 PPIP5K2O43314 1243 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 SMIM24O75264 130 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 SURF6O75683 361 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 RNF8O76064 485 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 TFRCP02786 760 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 HMOX1P09601 288 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ATP4AP20648 1035 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 TPP2P29144 1249 aaPredicted RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 CNGA1P29973 690 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 RANBP1P43487 201 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 APLP1P51693 650 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 EPHB4P54760 987 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 HDLBPQ00341 1268 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ITIH3Q06033 890 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 SFSWAPQ12872 951 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 DYNC1I2Q13409 638 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 CUL3Q13618 768 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 OCLNQ16625 522 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 DBN1Q16643 649 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 OXLD1Q5BKU9 147 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 PPP1R18Q6NYC8 613 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ARFGAP2Q8N6H7 521 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ATL2Q8NHH9 583 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ATRIPQ8WXE1 791 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF516Q92618 1163 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 CAVIN3Q969G5 261 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 CYFIP2Q96F07 1278 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 GDAP1L1Q96MZ0 367 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 PURBQ96QR8 312 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 PRKD2Q9BZL6 878 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 PRDM16Q9HAZ2 1276 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 SLC5A4Q9NY91 659 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ANKIB1Q9P2G1 1089 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 SEPT3Q9UH03 358 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 BAIAP2L1Q9UHR4 511 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 DACH1Q9UI36 760 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 WWC3Q9ULE0 1092 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF232Q9UNY5 417 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 VWDEQ8N2E2 1590 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 DIP2CQ9Y2E4 1556 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 UBN2Q6ZU65 1347 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 A0A1W2PP64 1363 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 A0A1B0GTH6 734 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 FAM237AA0A1B0GTK4 181 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CFAP73A6NFT4 308 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 HMGB1P1B2RPK0 211 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 E7EVH7 732 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 F6X3S4 739 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 GSTA1P08263 222 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 PFKFB1P16118 471 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 JUNDP17535 347 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CCND1P24385 295 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 TNFRSF8P28908 595 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 IL13P35225 146 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ATP1A2P50993 1020 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CCNG1P51959 295 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 GUCY1A3Q02108 690 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 RBL2Q08999 1139 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 PTPRNQ16849 979 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 KIAA0753Q2KHM9 967 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 EML3Q32P44 896 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ARMC3Q5W041 872 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CC2D2BQ6DHV5 1058 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SYNE3Q6ZMZ3 975 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 Q6ZUG5 572 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CNGA4Q8IV77 575 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 IQCKQ8N0W5 287 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 MLKLQ8NB16 471 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 NSUN7Q8NE18 718 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 HVCN1Q96D96 273 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 GPATCH3Q96I76 525 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 TCEANC2Q96MN5 208 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF570Q96NI8 536 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SIL1Q9H173 461 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ECHDC1Q9NTX5 307 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 DNAAF2Q9NVR5 837 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SETD1BQ9UPS6 1966 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 QRICH2Q9H0J4 1663 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ABCC6O95255 1503 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 A0A0U1RQJ8 604 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 FAM83GA6ND36 823 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 C5orf60A6NFR6 353 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 FMNL1O95466 1100 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 NPTXRO95502 500 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 VIMP08670 466 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ALADP13716 330 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 NR1D1P20393 614 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 KIF5BP33176 963 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SYKP43405 635 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SEC24CP53992 1094 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SAFB2Q14151 953 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF268Q14587 947 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC178Q5BJE1 867 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 RRP12Q5JTH9 1297 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 USPL1Q5W0Q7 1092 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms