RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 RASEFQ8IZ41 740 aa22.3■■□□□ 1.16
EPHB4-207ENST00000489808 DPF3Q92784 378 aa22.3■■□□□ 1.16
EPHB4-207ENST00000489808 TMEM87BQ96K49 555 aa22.3■■□□□ 1.16
EPHB4-207ENST00000489808 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.3■■□□□ 1.16
EPHB4-207ENST00000489808 NFIBO00712 420 aa22.29■■□□□ 1.16
EPHB4-207ENST00000489808 DHX16O60231 1041 aaKnown RBP22.29■■□□□ 1.16
EPHB4-207ENST00000489808 BAATQ14032 418 aaPredicted RBP22.29■■□□□ 1.16
EPHB4-207ENST00000489808 NEK1Q96PY6 1258 aa22.29■■□□□ 1.16
EPHB4-207ENST00000489808 C11orf49Q9H6J7 331 aa22.29■■□□□ 1.16
EPHB4-207ENST00000489808 ZNFX1Q9P2E3 1918 aaKnown RBP22.28■■□□□ 1.16
EPHB4-207ENST00000489808 SH2B2O14492 632 aaPredicted RBP22.28■■□□□ 1.16
EPHB4-207ENST00000489808 ACVR2BQ13705 512 aa22.28■■□□□ 1.16
EPHB4-207ENST00000489808 QRICH1Q2TAL8 776 aa22.28■■□□□ 1.16
EPHB4-207ENST00000489808 PRPF38BQ5VTL8 546 aaKnown RBP22.28■■□□□ 1.16
EPHB4-207ENST00000489808 ARMCX2Q7L311 632 aa22.28■■□□□ 1.16
EPHB4-207ENST00000489808 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
EPHB4-207ENST00000489808 RGS22Q8NE09 1264 aa22.28■■□□□ 1.16
EPHB4-207ENST00000489808 ABHD16BQ9H3Z7 469 aa22.28■■□□□ 1.16
EPHB4-207ENST00000489808 ASB14A6NK59 587 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 COL6A1P12109 1028 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 LIFRP42702 1097 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 USH1GQ495M9 461 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 PDE4DIPQ5VU43 2346 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 ARRDC4Q8NCT1 418 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 KCNB2Q92953 911 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 MTMR8Q96EF0 704 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 PURBQ96QR8 312 aaKnown RBP22.27■■□□□ 1.16
EPHB4-207ENST00000489808 MAP3K14Q99558 947 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 FAM184BQ9ULE4 1060 aa22.27■■□□□ 1.16
EPHB4-207ENST00000489808 PTPDC1A2A3K4 754 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 RARBP10826 455 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 AKR1A1P14550 325 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 EXOSC10Q01780 885 aaKnown RBP22.26■■□□□ 1.15
EPHB4-207ENST00000489808 KRT32Q14532 448 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 SLC35G1Q2M3R5 365 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 RNF207Q6ZRF8 634 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 FBXO11Q86XK2 927 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 ZNF654Q8IZM8 581 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 NUP133Q8WUM0 1156 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 RIOX1Q9H6W3 641 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 ZHX1Q9UKY1 873 aaPredicted RBP22.26■■□□□ 1.15
EPHB4-207ENST00000489808 ASTN1O14525 1302 aa22.26■■□□□ 1.15
EPHB4-207ENST00000489808 DNM1LO00429 736 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 DDAH1O94760 285 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 REC8O95072 547 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 CALML3P27482 149 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 ADCK5Q3MIX3 580 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 GJC2Q5T442 439 aaPredicted RBP22.25■■□□□ 1.15
EPHB4-207ENST00000489808 NFXL1Q6ZNB6 911 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 DHX32Q7L7V1 743 aaKnown RBP22.25■■□□□ 1.15
EPHB4-207ENST00000489808 LRRC2Q9BYS8 371 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 MAF1Q9H063 256 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 KATNBL1Q9H079 304 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 ABCB11O95342 1321 aa22.25■■□□□ 1.15
EPHB4-207ENST00000489808 CCDC69A6NI79 296 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 ZBTB5O15062 677 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 HSPA4P34932 840 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 RPS6P62753 249 aaKnown RBP22.24■■□□□ 1.15
EPHB4-207ENST00000489808 TBC1D5Q92609 795 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 MYL10Q9BUA6 226 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 AMNQ9BXJ7 453 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 XPNPEP3Q9NQH7 507 aa22.24■■□□□ 1.15
EPHB4-207ENST00000489808 ADD3Q9UEY8 706 aaKnown RBP22.24■■□□□ 1.15
EPHB4-207ENST00000489808 MRPL11Q9Y3B7 192 aaKnown RBP22.24■■□□□ 1.15
EPHB4-207ENST00000489808 CYTH3O43739 400 aa22.23■■□□□ 1.15
EPHB4-207ENST00000489808 LRRC41Q15345 812 aa22.23■■□□□ 1.15
EPHB4-207ENST00000489808 SLC30A10Q6XR72 485 aa22.23■■□□□ 1.15
EPHB4-207ENST00000489808 MORC4Q8TE76 937 aa22.23■■□□□ 1.15
EPHB4-207ENST00000489808 NR2E3Q9Y5X4 410 aa22.23■■□□□ 1.15
EPHB4-207ENST00000489808 DDX49Q9Y6V7 483 aaKnown RBP22.23■■□□□ 1.15
EPHB4-207ENST00000489808 LOC102724159A0A0B4J2E5 919 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 EVI5O60447 810 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 PPP1R11O60927 126 aaPredicted RBP22.22■■□□□ 1.15
EPHB4-207ENST00000489808 KIF5BP33176 963 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 PWP2Q15269 919 aaKnown RBP22.22■■□□□ 1.15
EPHB4-207ENST00000489808 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 SGMS1Q86VZ5 419 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 MCF2L2Q86YR7 1114 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 CTCFLQ8NI51 663 aaPredicted RBP22.22■■□□□ 1.15
EPHB4-207ENST00000489808 PIGSQ96S52 555 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 SENP6Q9GZR1 1112 aaPredicted RBP22.22■■□□□ 1.15
EPHB4-207ENST00000489808 SLC12A7Q9Y666 1083 aa22.22■■□□□ 1.15
EPHB4-207ENST00000489808 H0YGN5 161 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 EPB41L2O43491 1005 aaKnown RBP22.21■■□□□ 1.15
EPHB4-207ENST00000489808 DUSP11O75319 330 aaKnown RBP22.21■■□□□ 1.15
EPHB4-207ENST00000489808 PGK1P00558 417 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 MYCNP04198 464 aaPredicted RBP22.21■■□□□ 1.15
EPHB4-207ENST00000489808 HMGB1P09429 215 aaKnown RBP22.21■■□□□ 1.15
EPHB4-207ENST00000489808 CALM1P0DP23 149 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 CALM2P0DP24 149 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 CALM3P0DP25 149 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 SMARCA1P28370 1054 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 ALDH5A1P51649 535 aaPredicted RBP22.21■■□□□ 1.15
EPHB4-207ENST00000489808 DNERQ8NFT8 737 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 LZTS2Q9BRK4 669 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 PCDHA1Q9Y5I3 950 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 SNX14Q9Y5W7 946 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 SMCHD1A6NHR9 2005 aa22.21■■□□□ 1.15
EPHB4-207ENST00000489808 PNMA6FA0A0J9YX94 578 aa22.2■■□□□ 1.14
EPHB4-207ENST00000489808 KBTBD13C9JR72 458 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms