RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 GPRC5AQ8NFJ5 357 aa15.99■□□□□ 0.15
C9orf3-221ENST00000489562 GPKOWQ92917 476 aaPredicted RBP eCLIP15.99■□□□□ 0.15
C9orf3-221ENST00000489562 CFHR5Q9BXR6 569 aa15.99■□□□□ 0.15
C9orf3-221ENST00000489562 BTBD7Q9P203 1132 aa15.99■□□□□ 0.15
C9orf3-221ENST00000489562 ZNFX1Q9P2E3 1918 aaKnown RBP15.99■□□□□ 0.15
C9orf3-221ENST00000489562 MGAMO43451 1857 aa15.99■□□□□ 0.15
C9orf3-221ENST00000489562 CNMDO75829 334 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 GNA11P29992 359 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 CRHR2Q13324 411 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 USH1GQ495M9 461 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 SAMD3Q8N6K7 520 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 CHST13Q8NET6 341 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 COA7Q96BR5 231 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 AGBL1Q96MI9 1066 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 AIFM3Q96NN9 605 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 TXNRD2Q9NNW7 524 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 PLXNB2O15031 1838 aa15.98■□□□□ 0.15
C9orf3-221ENST00000489562 BCRP11274 1271 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 ALAS1P13196 640 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 MCF2L2Q86YR7 1114 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 ANKRD13CQ8N6S4 541 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 FBXO18Q8NFZ0 1043 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 ZMYND12Q9H0C1 365 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 MROH8Q9H579 483 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 BRMS1Q9HCU9 246 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 C6orf50Q9HD87 102 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 RNF146Q9NTX7 359 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 SAGE1Q9NXZ1 904 aa15.97■□□□□ 0.15
C9orf3-221ENST00000489562 H3BQV1 296 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 DTNBO60941 627 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 ADCY7P51828 1080 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 MRPL12P52815 198 aaKnown RBP15.96■□□□□ 0.15
C9orf3-221ENST00000489562 NLRP5P59047 1200 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-221ENST00000489562 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.15
C9orf3-221ENST00000489562 KRT40Q6A162 431 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 C17orf99Q6UX52 265 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.96■□□□□ 0.15
C9orf3-221ENST00000489562 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 CUL5Q93034 780 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 TRERF1Q96PN7 1200 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 PHF20Q9BVI0 1012 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 MOV10L1Q9BXT6 1211 aaKnown RBP15.96■□□□□ 0.15
C9orf3-221ENST00000489562 ACAD9Q9H845 621 aa15.96■□□□□ 0.15
C9orf3-221ENST00000489562 MAP3K20Q9NYL2 800 aaKnown RBP15.96■□□□□ 0.15
C9orf3-221ENST00000489562 SMCO2A6NFE2 343 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 MMP1P03956 469 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 SYT1P21579 422 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 GHRHRQ02643 423 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 MCTP2Q6DN12 878 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 TYW1BQ6NUM6 668 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 CCAR1Q8IX12 1150 aaKnown RBP15.95■□□□□ 0.14
C9orf3-221ENST00000489562 PSTPIP2Q9H939 334 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 RIC8AQ9NPQ8 531 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 RNF186Q9NXI6 227 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 CPA4Q9UI42 421 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 ZNF236Q9UL36 1845 aa15.95■□□□□ 0.14
C9orf3-221ENST00000489562 MYH15Q9Y2K3 1946 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 PIK3CDO00329 1044 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 STX6O43752 255 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 ERCC3P19447 782 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 MAPK4P31152 587 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 Q3C1V9 767 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 CLEC4DQ8WXI8 215 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 BEGAINQ9BUH8 593 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 HOMER2Q9NSB8 354 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-221ENST00000489562 PCDHA4Q9UN74 947 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 RIPK3Q9Y572 518 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 PLXNA1Q9UIW2 1896 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 DOCK3Q8IZD9 2030 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 PFASO15067 1338 aa15.94■□□□□ 0.14
C9orf3-221ENST00000489562 GCOM1H8Y6P7 765 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-221ENST00000489562 TRPA1O75762 1119 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 POLR2MP0CAP2 368 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 DDIT3P35638 169 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 KRT2P35908 639 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 FOSBP53539 338 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
C9orf3-221ENST00000489562 MUM1L1Q5H9M0 696 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 BLIDQ8IZY5 108 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 REXO1Q8N1G1 1221 aaKnown RBP15.93■□□□□ 0.14
C9orf3-221ENST00000489562 SHISA4Q96DD7 197 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 FOXP1Q9H334 677 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-221ENST00000489562 KCNJ14Q9UNX9 436 aa15.93■□□□□ 0.14
C9orf3-221ENST00000489562 MYH7BA7E2Y1 1941 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 LCTP09848 1927 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-221ENST00000489562 NFIBO00712 420 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 OPLAHO14841 1288 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 STRNO43815 780 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 PEX10O60683 326 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 HSD17B4P51659 736 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 NUCB2P80303 420 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 GUCY1B3Q02153 619 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms