RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 FGFR2P21802 821 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 RPS8P62241 208 aaKnown RBP9.34□□□□□ -0.91
SMC6-209ENST00000489535 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 UBASH3BQ8TF42 649 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMC6-209ENST00000489535 RPGRQ92834 1020 aaKnown RBP9.34□□□□□ -0.91
SMC6-209ENST00000489535 EDC3Q96F86 508 aaKnown RBP9.34□□□□□ -0.91
SMC6-209ENST00000489535 ASIC4Q96FT7 647 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 LACRTQ9GZZ8 138 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
SMC6-209ENST00000489535 LRFN2Q9ULH4 789 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 MYH8P13535 1937 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 RFX7Q2KHR2 1363 aa9.34□□□□□ -0.91
SMC6-209ENST00000489535 FOCADQ5VW36 1801 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 FSCN2O14926 492 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 DDX3YO15523 660 aaKnown RBP9.33□□□□□ -0.92
SMC6-209ENST00000489535 ITGB5P18084 799 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 PREPP48147 710 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 RBM25P49756 843 aaKnown RBP9.33□□□□□ -0.92
SMC6-209ENST00000489535 ATP11AP98196 1134 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 GRAPQ13588 217 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 CWC27Q6UX04 472 aaKnown RBP9.33□□□□□ -0.92
SMC6-209ENST00000489535 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
SMC6-209ENST00000489535 RUFY2Q8WXA3 655 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 LPIN2Q92539 896 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
SMC6-209ENST00000489535 KCNF1Q9H3M0 494 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 PAG1Q9NWQ8 432 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 MINPP1Q9UNW1 487 aa9.33□□□□□ -0.92
SMC6-209ENST00000489535 SNAP23O00161 211 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 GOLIM4O00461 696 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 SGSM2O43147 1006 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 MMP10P09238 476 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 CDC27P30260 824 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 DPYDQ12882 1025 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 NMIQ13287 307 aaPredicted RBP9.32□□□□□ -0.92
SMC6-209ENST00000489535 COL13A1Q5TAT6 717 aaPredicted RBP9.32□□□□□ -0.92
SMC6-209ENST00000489535 TREML1Q86YW5 311 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 RBM17Q96I25 401 aaKnown RBP9.32□□□□□ -0.92
SMC6-209ENST00000489535 USP26Q9BXU7 913 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 IL25Q9H293 177 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 ANGEL1Q9UNK9 670 aaKnown RBP9.32□□□□□ -0.92
SMC6-209ENST00000489535 MYH1P12882 1939 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 NAV1Q8NEY1 1877 aa9.32□□□□□ -0.92
SMC6-209ENST00000489535 RAD50Q92878 1312 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 UQCRFS1P1P0C7P4 283 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 MCAMP43121 646 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 ZAP70P43403 619 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 PHKA1P46020 1223 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 FKBP4Q02790 459 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMC6-209ENST00000489535 PTK7Q13308 1070 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 COL19A1Q14993 1142 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 CRY2Q49AN0 593 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 CRTC2Q53ET0 693 aaPredicted RBP9.31□□□□□ -0.92
SMC6-209ENST00000489535 KBTBD3Q8NAB2 608 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 FAM227BQ96M60 508 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 MFSD14AQ96MC6 490 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 ANKRD2Q9GZV1 360 aa9.31□□□□□ -0.92
SMC6-209ENST00000489535 DUOX1Q9NRD9 1551 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 A0A0D9SFI3 127 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 PRNPP04156 253 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 MCCP23508 829 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 CDC25BP30305 580 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 KCNJ4P48050 445 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 TRIP4Q15650 581 aaPredicted RBP9.3□□□□□ -0.92
SMC6-209ENST00000489535 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 ZNF512BQ96KM6 892 aaPredicted RBP9.3□□□□□ -0.92
SMC6-209ENST00000489535 ANTXR1Q9H6X2 564 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 HIF3AQ9Y2N7 669 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 ARFGEF1Q9Y6D6 1849 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 FER1L6Q2WGJ9 1857 aa9.3□□□□□ -0.92
SMC6-209ENST00000489535 MYH6P13533 1939 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 MED23Q9ULK4 1368 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 SART1O43290 800 aaKnown RBP9.29□□□□□ -0.92
SMC6-209ENST00000489535 WEE1P30291 646 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 PDE6BP35913 854 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 ANKRD34AQ69YU3 496 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 KRTAP5-3Q6L8H2 238 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 PI16Q6UXB8 463 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 OR13H1Q8NG92 308 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 CRAMP1Q96RY5 1269 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 BRIP1Q9BX63 1249 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 LSG1Q9H089 658 aaKnown RBP9.29□□□□□ -0.92
SMC6-209ENST00000489535 SCN9AQ15858 1988 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 ADAMTSL1Q8N6G6 1762 aa9.29□□□□□ -0.92
SMC6-209ENST00000489535 KLRG2A4D1S0 409 aaPredicted RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 WTIPA6NIX2 430 aaPredicted RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 RNF113AO15541 343 aaKnown RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 EPB41L2O43491 1005 aaKnown RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 FOSL1P15407 271 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 EPHA1P21709 976 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 GYG1P46976 350 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 BECN1Q14457 450 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 LRRFIP1Q32MZ4 808 aaKnown RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 CAVIN4Q5BKX8 364 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms