RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 USP26Q9BXU7 913 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 ASTN1O14525 1302 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 WDR19Q8NEZ3 1342 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 POTEB2H3BUK9 544 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 CYTH3O43739 400 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 PPP1R11O60927 126 aaPredicted RBP14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 CNGA1P29973 690 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 GJA8P48165 433 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 RGS19P49795 217 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 PIGSQ96S52 555 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 BRPF3Q9ULD4 1205 aa14.28□□□□□ -0.12
SMARCD3-213ENST00000489503 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 SOWAHBA6NEL2 793 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 SGPL1O95470 568 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 SEC24BO95487 1268 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 LIFRP42702 1097 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 MLLT1Q03111 559 aaPredicted RBP14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 BAATQ14032 418 aaPredicted RBP14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 BLOC1S2Q6QNY1 142 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 FAM133AQ8N9E0 248 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 CTCFLQ8NI51 663 aaPredicted RBP14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 DIS3LQ8TF46 1054 aaKnown RBP14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 LENG1Q96BZ8 264 aaPredicted RBP14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 TINF2Q9BSI4 451 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 CYP39A1Q9NYL5 469 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
SMARCD3-213ENST00000489503 PFASO15067 1338 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 CALML3P27482 149 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 APOBRQ0VD83 1088 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 APOA5Q6Q788 366 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 Q6ZUG5 572 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 MTMR8Q96EF0 704 aa14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
SMARCD3-213ENST00000489503 ABCB11O95342 1321 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 FARP2O94887 1054 aaPredicted RBP14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 SNAI1O95863 264 aaPredicted RBP14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 FGD1P98174 961 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 LHX8Q68G74 356 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 ARMCX2Q7L311 632 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 SRBD1Q8N5C6 995 aaKnown RBP14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 BRF1Q92994 677 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 RIOX1Q9H6W3 641 aa14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 ZHX1Q9UKY1 873 aaPredicted RBP14.25□□□□□ -0.13
SMARCD3-213ENST00000489503 GOLGA8AA7E2F4 631 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 GOLGA8BA8MQT2 603 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 ZBTB5O15062 677 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 HMGB1P09429 215 aaKnown RBP14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 ZNF865P0CJ78 1059 aaPredicted RBP14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 KIF5BP33176 963 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 RPS6P62753 249 aaKnown RBP14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 RNF207Q6ZRF8 634 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 TMTC3Q6ZXV5 915 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 TMTC2Q8N394 836 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 CCDC82Q8N4S0 544 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 AMNQ9BXJ7 453 aa14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 DDX20Q9UHI6 824 aaKnown RBP14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 TNRC18O15417 2968 aaPredicted RBP14.24□□□□□ -0.13
SMARCD3-213ENST00000489503 SYNGAP1Q96PV0 1343 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 PDE4DIPQ5VU43 2346 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 OPLAHO14841 1288 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 ZBTB43O43298 467 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 CALM1P0DP23 149 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 CALM2P0DP24 149 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 CALM3P0DP25 149 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 PTGS1P23219 599 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 RTN1Q16799 776 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 C8orf34Q49A92 452 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 EEPD1Q7L9B9 569 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 FBXO16Q8IX29 292 aaPredicted RBP14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 FANCBQ8NB91 859 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 MAP3K14Q99558 947 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 LARP6Q9BRS8 491 aaKnown RBP14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 SPZ1Q9BXG8 430 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 COL20A1Q9P218 1284 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 OGDHLQ9ULD0 1010 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 PCDHA1Q9Y5I3 950 aa14.23□□□□□ -0.13
SMARCD3-213ENST00000489503 ALPK3Q96L96 1907 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms