RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CYP39A1Q9NYL5 469 aa15.59■□□□□ 0.09
CCL28-202ENST00000489442 NRBP1Q9UHY1 535 aa15.59■□□□□ 0.09
CCL28-202ENST00000489442 WDR19Q8NEZ3 1342 aa15.58■□□□□ 0.09
CCL28-202ENST00000489442 SYNGAP1Q96PV0 1343 aa15.58■□□□□ 0.09
CCL28-202ENST00000489442 ANO1Q5XXA6 986 aa15.58■□□□□ 0.08
CCL28-202ENST00000489442 MAMDC4Q6UXC1 1216 aa15.58■□□□□ 0.08
CCL28-202ENST00000489442 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
CCL28-202ENST00000489442 NEK1Q96PY6 1258 aa15.58■□□□□ 0.08
CCL28-202ENST00000489442 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
CCL28-202ENST00000489442 MAD2L2Q9UI95 211 aa15.58■□□□□ 0.08
CCL28-202ENST00000489442 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.08
CCL28-202ENST00000489442 PALM3A6NDB9 673 aaPredicted RBP15.57■□□□□ 0.08
CCL28-202ENST00000489442 ASB14A6NK59 587 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 NFIBO00712 420 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 TROAPQ12815 778 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 BAATQ14032 418 aaPredicted RBP15.57■□□□□ 0.08
CCL28-202ENST00000489442 GRM4Q14833 912 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 QRICH1Q2TAL8 776 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 RNF207Q6ZRF8 634 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 UBE2Q1Q7Z7E8 422 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 FBXO11Q86XK2 927 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 FAM133AQ8N9E0 248 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 ARRDC4Q8NCT1 418 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 DIS3LQ8TF46 1054 aaKnown RBP15.57■□□□□ 0.08
CCL28-202ENST00000489442 LRRC2Q9BYS8 371 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 JMJD4Q9H9V9 463 aa15.57■□□□□ 0.08
CCL28-202ENST00000489442 GPHNQ9NQX3 736 aaPredicted RBP15.57■□□□□ 0.08
CCL28-202ENST00000489442 ADD3Q9UEY8 706 aaKnown RBP15.57■□□□□ 0.08
CCL28-202ENST00000489442 SH2B2O14492 632 aaPredicted RBP15.56■□□□□ 0.08
CCL28-202ENST00000489442 RARBP10826 455 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 AKR1A1P14550 325 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 CALML3P27482 149 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 KIF5BP33176 963 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 TSGA10IPQ3SY00 556 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 PPP4R3CPQ6ZMV5 832 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 SYNE3Q6ZMZ3 975 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 ARMCX2Q7L311 632 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 ABHD16BQ9H3Z7 469 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 C11orf49Q9H6J7 331 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
CCL28-202ENST00000489442 FAM184BQ9ULE4 1060 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 ABCB11O95342 1321 aa15.56■□□□□ 0.08
CCL28-202ENST00000489442 SOWAHBA6NEL2 793 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 DDAH1O94760 285 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 SNAI1O95863 264 aaPredicted RBP15.55■□□□□ 0.08
CCL28-202ENST00000489442 HMGB1P09429 215 aaKnown RBP15.55■□□□□ 0.08
CCL28-202ENST00000489442 CALM1P0DP23 149 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 CALM2P0DP24 149 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 CALM3P0DP25 149 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 LIFRP42702 1097 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 FGD1P98174 961 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 TRAF1Q13077 416 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 ACVR2BQ13705 512 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
CCL28-202ENST00000489442 HOMER1Q86YM7 354 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 CLEC4DQ8WXI8 215 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 MPHOSPH6Q99547 160 aaKnown RBP15.55■□□□□ 0.08
CCL28-202ENST00000489442 MYL10Q9BUA6 226 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
CCL28-202ENST00000489442 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
CCL28-202ENST00000489442 DNAH12Q6ZR08 3092 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 KBTBD13C9JR72 458 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 ZBTB5O15062 677 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 EVI5O60447 810 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 ZNF865P0CJ78 1059 aaPredicted RBP15.54■□□□□ 0.08
CCL28-202ENST00000489442 RPS6P62753 249 aaKnown RBP15.54■□□□□ 0.08
CCL28-202ENST00000489442 ADCK5Q3MIX3 580 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 GJC2Q5T442 439 aaPredicted RBP15.54■□□□□ 0.08
CCL28-202ENST00000489442 PRPF38BQ5VTL8 546 aaKnown RBP15.54■□□□□ 0.08
CCL28-202ENST00000489442 MCF2L2Q86YR7 1114 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 FGD4Q96M96 766 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 NR2E3Q9Y5X4 410 aa15.54■□□□□ 0.08
CCL28-202ENST00000489442 B4DLN1 442 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 DNM1LO00429 736 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 HSPA4P34932 840 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 GNAQP50148 359 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 SLC30A10Q6XR72 485 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 NOL8Q76FK4 1167 aaKnown RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 RNF180Q86T96 592 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 RGS22Q8NE09 1264 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 PURBQ96QR8 312 aaKnown RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 PIGSQ96S52 555 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 SENP6Q9GZR1 1112 aaPredicted RBP15.53■□□□□ 0.08
CCL28-202ENST00000489442 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 PCDHA1Q9Y5I3 950 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 LCTP09848 1927 aa15.53■□□□□ 0.08
CCL28-202ENST00000489442 RXRAP19793 462 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms