RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
BRCA1-218ENST00000489037 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
BRCA1-218ENST00000489037 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
BRCA1-218ENST00000489037 ABHD16BQ9H3Z7 469 aa16.63■□□□□ 0.25
BRCA1-218ENST00000489037 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-218ENST00000489037 ADD3Q9UEY8 706 aaKnown RBP16.63■□□□□ 0.25
BRCA1-218ENST00000489037 ZHX1Q9UKY1 873 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-218ENST00000489037 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
BRCA1-218ENST00000489037 ABCB11O95342 1321 aa16.63■□□□□ 0.25
BRCA1-218ENST00000489037 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-218ENST00000489037 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-218ENST00000489037 AKR1A1P14550 325 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 KIF5BP33176 963 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-218ENST00000489037 RNF207Q6ZRF8 634 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 ARMCX2Q7L311 632 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 FBXO11Q86XK2 927 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-218ENST00000489037 DIS3LQ8TF46 1054 aaKnown RBP16.62■□□□□ 0.25
BRCA1-218ENST00000489037 NEK1Q96PY6 1258 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 MAD2L2Q9UI95 211 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 BRCA2P51587 3418 aa16.62■□□□□ 0.25
BRCA1-218ENST00000489037 TNRC18O15417 2968 aaPredicted RBP16.61■□□□□ 0.25
BRCA1-218ENST00000489037 B4DLN1 442 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 EVI5O60447 810 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 DDAH1O94760 285 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 SNAI1O95863 264 aaPredicted RBP16.61■□□□□ 0.25
BRCA1-218ENST00000489037 CALM1P0DP23 149 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 CALM2P0DP24 149 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 CALM3P0DP25 149 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
BRCA1-218ENST00000489037 ACVR2BQ13705 512 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 ANO1Q5XXA6 986 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 MAP3K14Q99558 947 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 MAF1Q9H063 256 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 JMJD4Q9H9V9 463 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
BRCA1-218ENST00000489037 MRPL11Q9Y3B7 192 aaKnown RBP16.61■□□□□ 0.25
BRCA1-218ENST00000489037 SOWAHBA6NEL2 793 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 DNM1LO00429 736 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 NFIBO00712 420 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
BRCA1-218ENST00000489037 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
BRCA1-218ENST00000489037 ZNF865P0CJ78 1059 aaPredicted RBP16.6■□□□□ 0.25
BRCA1-218ENST00000489037 TAL1P17542 331 aaPredicted RBP16.6■□□□□ 0.25
BRCA1-218ENST00000489037 CALML3P27482 149 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 LIFRP42702 1097 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 GNAQP50148 359 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 TROAPQ12815 778 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 CLEC4DQ8WXI8 215 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 SENP2Q9HC62 589 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 XPNPEP3Q9NQH7 507 aa16.6■□□□□ 0.25
BRCA1-218ENST00000489037 CEP290O15078 2479 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 LOC102724159A0A0B4J2E5 919 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 ZBTB5O15062 677 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 FGD1P98174 961 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 PWP2Q15269 919 aaKnown RBP16.59■□□□□ 0.25
BRCA1-218ENST00000489037 GJC2Q5T442 439 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-218ENST00000489037 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
BRCA1-218ENST00000489037 RNF180Q86T96 592 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 FGD4Q96M96 766 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 LZTS2Q9BRK4 669 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 SLC12A7Q9Y666 1083 aa16.59■□□□□ 0.25
BRCA1-218ENST00000489037 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
BRCA1-218ENST00000489037 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
BRCA1-218ENST00000489037 HOMER1Q86YM7 354 aa16.58■□□□□ 0.24
BRCA1-218ENST00000489037 LRRC2Q9BYS8 371 aa16.58■□□□□ 0.24
BRCA1-218ENST00000489037 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
BRCA1-218ENST00000489037 RIOX1Q9H6W3 641 aa16.58■□□□□ 0.24
BRCA1-218ENST00000489037 LCTP09848 1927 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 EPB41L2O43491 1005 aaKnown RBP16.57■□□□□ 0.24
BRCA1-218ENST00000489037 HSPA4P34932 840 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
BRCA1-218ENST00000489037 LRRC41Q15345 812 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 CCDC144BQ3MJ40 725 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 SLC30A10Q6XR72 485 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
BRCA1-218ENST00000489037 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
BRCA1-218ENST00000489037 PCDHA1Q9Y5I3 950 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 ALPK3Q96L96 1907 aa16.57■□□□□ 0.24
BRCA1-218ENST00000489037 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 DUSP11O75319 330 aaKnown RBP16.56■□□□□ 0.24
BRCA1-218ENST00000489037 COL6A1P12109 1028 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 PSMA5P28066 241 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 SMARCA1P28370 1054 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 PDE4DQ08499 809 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 421.4 ms