RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 LRRC31Q6UY01 552 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 GBP6Q6ZN66 633 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 KIAA0825Q8IV33 1275 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 RNF26Q9BY78 433 aaPredicted RBP8.56□□□□□ -1.04
BEST3-205ENST00000488961 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.56□□□□□ -1.04
BEST3-205ENST00000488961 PUF60Q9UHX1 559 aaKnown RBP8.56□□□□□ -1.04
BEST3-205ENST00000488961 LAMA2P24043 3122 aaKnown RBP8.56□□□□□ -1.04
BEST3-205ENST00000488961 SYNRGQ9UMZ2 1314 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 CCDC194A0A1B0GVG4 234 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 SSBP05455 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
BEST3-205ENST00000488961 FCER1AP12319 257 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 HSPA1LP34931 641 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 TXKP42681 527 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 ARMC3Q5W041 872 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 DPP8Q6V1X1 898 aaPredicted RBP8.56□□□□□ -1.04
BEST3-205ENST00000488961 VSTM4Q8IW00 320 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 EYA3Q99504 573 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 CD209Q9NNX6 404 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 DDX4Q9NQI0 724 aaKnown RBP8.56□□□□□ -1.04
BEST3-205ENST00000488961 MAD2L2Q9UI95 211 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.56□□□□□ -1.04
BEST3-205ENST00000488961 RTL9Q8NET4 1388 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 WDR19Q8NEZ3 1342 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 DUOX1Q9NRD9 1551 aa8.56□□□□□ -1.04
BEST3-205ENST00000488961 A0A087WUV0 522 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 PRPF3O43395 683 aaKnown RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 ERLIN2O94905 339 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 ELF1P32519 619 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 STAT6P42226 847 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 CDK8P49336 464 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 FXR1P51114 621 aaKnown RBP eCLIP8.55□□□□□ -1.04
BEST3-205ENST00000488961 NFIAQ12857 509 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 MORC3Q14149 939 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 LRRC41Q15345 812 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 C12orf60Q5U649 245 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 OTUD6BQ8N6M0 293 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 N4BP2L2Q92802 583 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 THOC1Q96FV9 657 aaKnown RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 BAG1Q99933 345 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 BRIP1Q9BX63 1249 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 THRAP3Q9Y2W1 955 aaKnown RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 RPS6KL1Q9Y6S9 549 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 BTAF1O14981 1849 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 EME2A4GXA9 379 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 POTEMA6NI47 508 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 G3V3G9 751 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 N4BP1O75113 896 aaKnown RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 GYS1P13807 737 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 AKR1B1P15121 316 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 RASA1P20936 1047 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 DNA2P51530 1060 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 ZSCAN29Q8IWY8 852 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 BLIDQ8IZY5 108 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 IGSF22Q8N9C0 903 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 TC2NQ8N9U0 490 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 CDCA7Q9BWT1 371 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 FUT8Q9BYC5 575 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 NYXQ9GZU5 481 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 FRMD3A2A2Y4 597 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 PRCPP42785 496 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 CCNHP51946 323 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 GRAPQ13588 217 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 PTPROQ16827 1216 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 RAD9BQ6WBX8 426 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 BARGINQ6ZT62 677 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 TMTC2Q8N394 836 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 GRAPLQ8TC17 118 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 PDGFDQ9GZP0 370 aaPredicted RBP8.55□□□□□ -1.04
BEST3-205ENST00000488961 PDE11AQ9HCR9 933 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 FAN1Q9Y2M0 1017 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 PPP2R2CQ9Y2T4 447 aa8.55□□□□□ -1.04
BEST3-205ENST00000488961 STK36Q9NRP7 1315 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 ENC1O14682 589 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 N4BP3O15049 544 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 TADA3O75528 432 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 TNNI2P48788 182 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 APBA1Q02410 837 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 CCDC84Q86UT8 332 aaPredicted RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 DNAAF5Q86Y56 855 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 SPICE1Q8N0Z3 855 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 CCDC155Q8N6L0 562 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 NELFBQ8WX92 580 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 GDAP1L1Q96MZ0 367 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 CHP1Q99653 195 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 SLF1Q9BQI6 1058 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 OSBPL5Q9H0X9 879 aaPredicted RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 BCAS3Q9H6U6 928 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 PCDHA6Q9UN73 950 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 PCDHA8Q9Y5H6 950 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 SMCO2A6NFE2 343 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 ATP8B1O43520 1251 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 C21orf2O43822 256 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 GDF11O95390 407 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms