RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 ASTN1O14525 1302 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 TRIM43BA6NCK2 446 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 ASB14A6NK59 587 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 NFIBO00712 420 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 C6orf222P0C671 652 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 BAATQ14032 418 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 IQCA1Q86XH1 822 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 UBA5Q9GZZ9 404 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 PDLIM7Q9NR12 457 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 LAMA3Q16787 3333 aa14.01□□□□□ -0.17
CCHCR1-215ENST00000488920 C11orf97A0A1B0GVM6 126 aaPredicted RBP14□□□□□ -0.17
CCHCR1-215ENST00000488920 PQBP1O60828 265 aaKnown RBP14□□□□□ -0.17
CCHCR1-215ENST00000488920 GJA9P57773 515 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 TNFAIP2Q03169 654 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 LRIT3Q3SXY7 679 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 GNASQ5JWF2 1037 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 EEPD1Q7L9B9 569 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 ENAHQ8N8S7 591 aaPredicted RBP14□□□□□ -0.17
CCHCR1-215ENST00000488920 PNMA1Q8ND90 353 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 CLEC4DQ8WXI8 215 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 ANKS1AQ92625 1134 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 BADQ92934 168 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 VTI1AQ96AJ9 217 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 KRT23Q9C075 422 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 UPF3AQ9H1J1 476 aaKnown RBP14□□□□□ -0.17
CCHCR1-215ENST00000488920 KAT14Q9H8E8 782 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 SPC25Q9HBM1 224 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 PDGFCQ9NRA1 345 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 SMCHD1A6NHR9 2005 aa14□□□□□ -0.17
CCHCR1-215ENST00000488920 PLXNA1Q9UIW2 1896 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 PTPDC1A2A3K4 754 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 ASGR1P07306 291 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 PTGS1P23219 599 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 CHMLP26374 656 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 NT5C2P49902 561 aa13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
CCHCR1-215ENST00000488920 TNKSO95271 1327 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 CTAGE5O15320 804 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 DYNC1LI2O43237 492 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 CLTBP09497 229 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 SMPD1P17405 629 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 ITGB8P26012 769 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 CALML3P27482 149 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 CST5P28325 142 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 BEX3Q00994 111 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 PTH1RQ03431 593 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 TMEM63BQ5T3F8 832 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 TAPT1Q6NXT6 567 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 SLC30A10Q6XR72 485 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 FBXO16Q8IX29 292 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 PCSK9Q8NBP7 692 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 GLT1D1Q96MS3 346 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 UBAC1Q9BSL1 405 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 CNNM2Q9H8M5 875 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
CCHCR1-215ENST00000488920 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 FAAP100Q0VG06 881 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 SHHQ15465 462 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 USH1GQ495M9 461 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 IQSEC1Q6DN90 963 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 RNF207Q6ZRF8 634 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 KIAA1211Q6ZU35 1233 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 CYB5R4Q7L1T6 521 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 ANKRD33Q7Z3H0 272 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 VAT1LQ9HCJ6 419 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 TMEM39AQ9NV64 488 aa13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
CCHCR1-215ENST00000488920 ELP1O95163 1332 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 RAD50Q92878 1312 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 KIAA0355O15063 1070 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 RAG1P15918 1043 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 ALDH5A1P51649 535 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 RPS6P62753 249 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 NKX3-2P78367 333 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 CDC37Q16543 378 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 C9orf50Q5SZB4 431 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 Q7L0L9 218 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 TLK2Q86UE8 772 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 DEFB123Q8N688 67 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 TOX2Q96NM4 488 aa13.96□□□□□ -0.17
CCHCR1-215ENST00000488920 VTA1Q9NP79 307 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms