RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 MFSD10Q14728 455 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 LDLRAD1Q5T700 205 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 GALNT17Q6IS24 598 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 POTEBQ6S5H4 581 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 CLEC17AQ6ZS10 378 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 BRAPQ7Z569 592 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 DIS3L2Q8IYB7 885 aaKnown RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 MTMR8Q96EF0 704 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 DDX27Q96GQ7 796 aaKnown RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 CLMNQ96JQ2 1002 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 C12orf42Q96LP6 360 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 ZNF396Q96N95 335 aaPredicted RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 FOXP1Q9H334 677 aaPredicted RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 C6orf50Q9HD87 102 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 CFAP45Q9UL16 551 aa8.69□□□□□ -1.02
APOBEC3A-203ENST00000488758 SMCO2A6NFE2 343 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 BTBD18B2RXH4 712 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 STXBP3O00186 592 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 FLOT1O75955 427 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 ITGBL1O95965 494 aaPredicted RBP8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 NUDT7P0C024 238 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 FDX1P10109 184 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 MCM4P33991 863 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 SNAP25P60880 206 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 KRT85P78386 507 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 DNM1Q05193 864 aaKnown RBP8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 USP17L24Q0WX57 530 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 PPIL2Q13356 520 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 DGKZQ13574 1117 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 CSPP1Q1MSJ5 1256 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 QRICH1Q2TAL8 776 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 CCDC174Q6PII3 467 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 GADL1Q6ZQY3 521 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 BLIDQ8IZY5 108 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 BICD2Q8TD16 824 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 COA7Q96BR5 231 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 OPTNQ96CV9 577 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 AMNQ9BXJ7 453 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 PCDHA4Q9UN74 947 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 PCDHA1Q9Y5I3 950 aa8.68□□□□□ -1.02
APOBEC3A-203ENST00000488758 DDX11L8A8MPP1 907 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 KIF28PB7ZC32 967 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 IRF6O14896 467 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 ZBED4O75132 1171 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 PTMSP20962 102 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 U2AF2P26368 475 aaKnown RBP eCLIP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 ADCY7P51828 1080 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 MRPL12P52815 198 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 COG2Q14746 738 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 VARS2Q5ST30 1063 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 ATL3Q6DD88 541 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 FAM173BQ6P4H8 233 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 CATSPERGQ6ZRH7 1159 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 FASTKD5Q7L8L6 764 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 NOSTRINQ8IVI9 506 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 PTCD2Q8WV60 388 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 ZMYND12Q9H0C1 365 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 RANBP17Q9H2T7 1088 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 FBXO28Q9NVF7 368 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 HOXC10Q9NYD6 342 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 PNMA2Q9UL42 364 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
APOBEC3A-203ENST00000488758 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 CCDC194A0A1B0GVG4 234 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 ESYT2A0FGR8 921 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 FOXN1O15353 648 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 PPP1R11O60927 126 aaPredicted RBP8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 PRPF40AO75400 957 aaKnown RBP8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 OSBPP22059 807 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 NR5A1Q13285 461 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 SNAPC2Q13487 334 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 USH1GQ495M9 461 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 MYSM1Q5VVJ2 828 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 CST9Q5W186 159 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 PROCA1Q8NCQ7 364 aaPredicted RBP8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
APOBEC3A-203ENST00000488758 SHISA4Q96DD7 197 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms