RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 COL9A3Q14050 684 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-207ENST00000488591 QRICH1Q2TAL8 776 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 USH1GQ495M9 461 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 ZNF467Q7Z7K2 595 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-207ENST00000488591 FBXO11Q86XK2 927 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
CXCL12-207ENST00000488591 TCEANC2Q96MN5 208 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 DEFB118Q96PH6 123 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 MYL10Q9BUA6 226 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 PLXNA1Q9UIW2 1896 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 ABCB11O95342 1321 aa17.49■□□□□ 0.39
CXCL12-207ENST00000488591 ZBTB5O15062 677 aa17.49■□□□□ 0.39
CXCL12-207ENST00000488591 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
CXCL12-207ENST00000488591 CNGA1P29973 690 aa17.49■□□□□ 0.39
CXCL12-207ENST00000488591 AMNQ9BXJ7 453 aa17.49■□□□□ 0.39
CXCL12-207ENST00000488591 RIOX1Q9H6W3 641 aa17.49■□□□□ 0.39
CXCL12-207ENST00000488591 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
CXCL12-207ENST00000488591 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
CXCL12-207ENST00000488591 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 IGHA2P01877 340 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 RPS6KB1P23443 525 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 CCND3P30281 292 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-207ENST00000488591 RNF207Q6ZRF8 634 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 Q6ZUG5 572 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 MCF2L2Q86YR7 1114 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 MAF1Q9H063 256 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 NRBP1Q9UHY1 535 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 CNPY2Q9Y2B0 182 aa17.48■□□□□ 0.39
CXCL12-207ENST00000488591 MRPL11Q9Y3B7 192 aaKnown RBP17.48■□□□□ 0.39
CXCL12-207ENST00000488591 MYH6P13533 1939 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 NFIBO00712 420 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 ZBTB43O43298 467 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 MSCO60682 206 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 CPA1P15085 419 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 TAL1P17542 331 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-207ENST00000488591 MLLT1Q03111 559 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-207ENST00000488591 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-207ENST00000488591 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 CLEC4DQ8WXI8 215 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 RRP36Q96EU6 259 aaKnown RBP17.47■□□□□ 0.39
CXCL12-207ENST00000488591 PIGSQ96S52 555 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 TM6SF1Q9BZW5 370 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 ADD3Q9UEY8 706 aaKnown RBP17.47■□□□□ 0.39
CXCL12-207ENST00000488591 NAP1L2Q9ULW6 460 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-207ENST00000488591 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
CXCL12-207ENST00000488591 PNMA6FA0A0J9YX94 578 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 KLF18A0A0U1RQI7 1052 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 ASB14A6NK59 587 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 CYBAP13498 195 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 RXRAP19793 462 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 CNTN2Q02246 1040 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 MPHOSPH6Q99547 160 aaKnown RBP17.46■□□□□ 0.39
CXCL12-207ENST00000488591 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 RBM28Q9NW13 759 aaKnown RBP17.46■□□□□ 0.39
CXCL12-207ENST00000488591 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
CXCL12-207ENST00000488591 PCDHA1Q9Y5I3 950 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 SMCHD1A6NHR9 2005 aa17.46■□□□□ 0.39
CXCL12-207ENST00000488591 CENPFP49454 3210 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 CYTH3O43739 400 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 CALML3P27482 149 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 RAB11FIP4Q86YS3 637 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 FBXL16Q8N461 479 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 TRPV1Q8NER1 839 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 BRF1Q92994 677 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 CRISPLD2Q9H0B8 497 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 DDX20Q9UHI6 824 aaKnown RBP17.45■□□□□ 0.38
CXCL12-207ENST00000488591 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
CXCL12-207ENST00000488591 SOWAHBA6NEL2 793 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 B4DLN1 442 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 SEPT4O43236 478 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
CXCL12-207ENST00000488591 RCAN1P53805 252 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 ANAPC15P60006 121 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 RPS6P62753 249 aaKnown RBP17.44■□□□□ 0.38
CXCL12-207ENST00000488591 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 RTN1Q16799 776 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 ARMCX2Q7L311 632 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
CXCL12-207ENST00000488591 ANKLE1Q8NAG6 615 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
CXCL12-207ENST00000488591 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-207ENST00000488591 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 CCDC196A0A1B0GTZ2 297 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms