RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 GMCL1Q96IK5 515 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 ZFYVE28Q9HCC9 887 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
NELFE-209ENST00000488426 ZBTB21Q9ULJ3 1066 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
NELFE-209ENST00000488426 PCDHA7Q9UN72 937 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 PCDHA4Q9UN74 947 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 CEP131Q9UPN4 1083 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 MORC2Q9Y6X9 1032 aaPredicted RBP14.56□□□□□ -0.08
NELFE-209ENST00000488426 ZSWIM8A7E2V4 1837 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 ATAD5Q96QE3 1844 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 PDHXO00330 501 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 TPRNQ4KMQ1 711 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 L1TD1Q5T7N2 865 aaKnown RBP14.55□□□□□ -0.08
NELFE-209ENST00000488426 SLFN13Q68D06 897 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 BLIDQ8IZY5 108 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 UBA5Q9GZZ9 404 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 CPVLQ9H3G5 476 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 ARHGEF10LQ9HCE6 1279 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 GPCPD1Q9NPB8 672 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 CPA4Q9UI42 421 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 ESYT2A0FGR8 921 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 SYCE3A1L190 88 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 TRIM75PA6NK02 468 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 TLR2O60603 784 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 BMP15O95972 392 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 CYP2C8P10632 490 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 SLC1A4P43007 532 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 TRAPPC10P48553 1259 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 CCDC73Q6ZRK6 1079 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 CCAR1Q8IX12 1150 aaKnown RBP14.55□□□□□ -0.08
NELFE-209ENST00000488426 MRPS27Q92552 414 aaKnown RBP14.55□□□□□ -0.08
NELFE-209ENST00000488426 PIGSQ96S52 555 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 ZMYND12Q9H0C1 365 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 PICK1Q9NRD5 415 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 GINM1Q9NU53 330 aa14.55□□□□□ -0.08
NELFE-209ENST00000488426 A0A0G2JLL6 359 aaPredicted RBP14.54□□□□□ -0.08
NELFE-209ENST00000488426 F5H6K3 240 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 CXCL11O14625 94 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 CAP2P40123 477 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 NAPAP54920 295 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 KLRC3Q07444 240 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 PPP1R18Q6NYC8 613 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 FBXO46Q6PJ61 603 aaPredicted RBP14.54□□□□□ -0.08
NELFE-209ENST00000488426 PRRT2Q7Z6L0 340 aaPredicted RBP14.54□□□□□ -0.08
NELFE-209ENST00000488426 ANKRD23Q86SG2 305 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 HOMER1Q86YM7 354 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 ADGRF4Q8IZF3 695 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 MTMR8Q96EF0 704 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 NUP62CLQ9H1M0 184 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 DACT1Q9NYF0 836 aa14.54□□□□□ -0.08
NELFE-209ENST00000488426 PNMA6FA0A0J9YX94 578 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 M0R2N6 131 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 ASNSP08243 561 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 GNA11P29992 359 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 RGS19P49795 217 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 C17orf99Q6UX52 265 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 GAS2L3Q86XJ1 694 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 SH2D4AQ9H788 454 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 JMJD4Q9H9V9 463 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 VAT1LQ9HCJ6 419 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 TMX2Q9Y320 296 aa14.53□□□□□ -0.08
NELFE-209ENST00000488426 CUTAO60888 179 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 NR1I2O75469 434 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 NDUFB10O96000 172 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 MRE11P49959 708 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 FAM160A1Q05DH4 1040 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 SPP2Q13103 211 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 PKN2Q16513 984 aaKnown RBP14.52□□□□□ -0.08
NELFE-209ENST00000488426 AXDND1Q5T1B0 1012 aaPredicted RBP14.52□□□□□ -0.08
NELFE-209ENST00000488426 KCTD1Q719H9 257 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 ERO1AQ96HE7 468 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 CLSTN2Q9H4D0 955 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 EFCC1Q9HA90 598 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 GOPCQ9HD26 462 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 C6orf50Q9HD87 102 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 PTPRFP10586 1907 aa14.52□□□□□ -0.08
NELFE-209ENST00000488426 ADGRA2Q96PE1 1338 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 DOCK1Q14185 1865 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 KIAA0100Q14667 2235 aaKnown RBP14.52□□□□□ -0.09
NELFE-209ENST00000488426 ZBTB5O15062 677 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 CMA1P23946 247 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 EARS2Q5JPH6 523 aaKnown RBP14.52□□□□□ -0.09
NELFE-209ENST00000488426 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 TTBK2Q6IQ55 1244 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 GADL1Q6ZQY3 521 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 GOLPH3LQ9H4A5 285 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 PCDHB6Q9Y5E3 794 aa14.52□□□□□ -0.09
NELFE-209ENST00000488426 A0A1W2PRG0 241 aa14.51□□□□□ -0.09
NELFE-209ENST00000488426 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
NELFE-209ENST00000488426 BMP3P12645 472 aa14.51□□□□□ -0.09
NELFE-209ENST00000488426 MARCKSP29966 332 aaPredicted RBP14.51□□□□□ -0.09
NELFE-209ENST00000488426 TTC38Q5R3I4 469 aa14.51□□□□□ -0.09
NELFE-209ENST00000488426 PIK3AP1Q6ZUJ8 805 aa14.51□□□□□ -0.09
NELFE-209ENST00000488426 KRI1Q8N9T8 703 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms