RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, human

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOB-209	ENST00000488325	TATDN1	Q6P1N9	297 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	C8orf76	Q96K31	380 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	TMEM47	Q9BQJ4	181 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	LZTS2	Q9BRK4	669 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	LRFN3	Q9BTN0	628 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	RNF26	Q9BY78	433 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	MYH8	P13535	1937 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	MUC6	Q6W4X9	2439 aa		13.93	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	TBC1D12	O60347	775 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	DEXI	O95424	95 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	TTLL1	O95922	423 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	FDPS	P14324	419 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	GCLC	P48506	637 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	RTP1	P59025	263 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	TRIM29	Q14134	588 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	NBR1	Q14596	966 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	GRM4	Q14833	912 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	TMEM179	Q6ZVK1	233 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	ALYREF	Q86V81	257 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	BAD	Q92934	168 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	CEP95	Q96GE4	821 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	NECAB3	Q96P71	396 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	ALG1	Q9BT22	464 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	SLC26A6	Q9BXS9	759 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	DNAJC18	Q9H819	358 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	CABP5	Q9NP86	173 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	MTMR4	Q9NYA4	1195 aa		13.92	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	XRCC5	P13010	732 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	CSPP1	Q1MSJ5	1256 aa		13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	TMTC3	Q6ZXV5	915 aa		13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	PHKB	Q93100	1093 aa		13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	KANSL2	Q9H9L4	492 aa		13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	ATP11B	Q9Y2G3	1177 aa		13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	SIPA1L1	O43166	1804 aa		13.91	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	PRPF3	O43395	683 aa	Known RBP	13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	DTNB	O60941	627 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	XBP1	P17861	261 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	DNAJB2	P25686	324 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	ABCB5	Q2M3G0	1257 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	POTEE	Q6S8J3	1075 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	RNPC3	Q96LT9	517 aa	Known RBP	13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	NUDT12	Q9BQG2	462 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	NYAP2	Q9P242	653 aa		13.9	□□□□□ -0.18
HLA-DOB-209	ENST00000488325	PARP1	P09874	1014 aa	Known RBP	13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FOSB	P53539	338 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	REST	Q13127	1097 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	MCTP1	Q6DN14	999 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	CCDC84	Q86UT8	332 aa	Predicted RBP	13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	TRMT44	Q8IYL2	757 aa	Known RBP	13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FBXO18	Q8NFZ0	1043 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	SOCS4	Q8WXH5	440 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ZNF576	Q9H609	170 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FRMPD3	Q5JV73	1810 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	PHIP	Q8WWQ0	1821 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	CNTNAP5	Q8WYK1	1306 aa		13.89	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GREB1L	Q9C091	1923 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FAM196B	A6NMK8	535 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	PPFIA3	O75145	1194 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	PLEKHA8P1	O95397	391 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	SMARCA1	P28370	1054 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ICA1	Q05084	483 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	SAFB	Q15424	915 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	CCL14	Q16627	93 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ASPRV1	Q53RT3	343 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GAS2L1	Q99501	681 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	MORF4L1	Q9UBU8	362 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	CLIP2	Q9UDT6	1046 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	SYNPO2	Q9UMS6	1093 aa		13.88	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	PALM3	A6NDB9	673 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	KRT85	P78386	507 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ATP2B2	Q01814	1243 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	MAP3K10	Q02779	954 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FUT2	Q10981	343 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ATL3	Q6DD88	541 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	BRAP	Q7Z569	592 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	FERMT3	Q86UX7	667 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	CCDC82	Q8N4S0	544 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	MKL1	Q969V6	931 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ANP32E	Q9BTT0	268 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	EPHX3	Q9H6B9	360 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GINM1	Q9NU53	330 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	MAD2L2	Q9UI95	211 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	DOCK1	Q14185	1865 aa		13.87	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	DNM1L	O00429	736 aa		13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	CTNND1	O60716	968 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GDF11	O95390	407 aa		13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GH2	P01242	217 aa		13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	PDHB	P11177	359 aa		13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	NCL	P19338	710 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GUCY1B3	Q02153	619 aa		13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	GNL2	Q13823	731 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DOB-209	ENST00000488325	SEPT2	Q15019	361 aa		13.86	□□□□□ -0.19

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