RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ZNF394Q53GI3 561 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 CDCP2Q5VXM1 449 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 NLRC3Q7RTR2 1065 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 REXO1Q8N1G1 1221 aaKnown RBP7.35□□□□□ -1.23
BRCA1-217ENST00000487825 MYLIPQ8WY64 445 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 ZNF512BQ96KM6 892 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-217ENST00000487825 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.35□□□□□ -1.23
BRCA1-217ENST00000487825 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-217ENST00000487825 CNNM2Q9H8M5 875 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 ADGRB3O60242 1522 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 ARHGAP31Q2M1Z3 1444 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 PNPLA6Q8IY17 1366 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 COL22A1Q8NFW1 1626 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-217ENST00000487825 CCNB3Q8WWL7 1395 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 RBM47A0AV96 593 aaKnown RBP7.34□□□□□ -1.23
BRCA1-217ENST00000487825 RNF4P78317 190 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 FANCCQ00597 558 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 MESP2Q0VG99 397 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-217ENST00000487825 NBPF12Q5TAG4 269 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-217ENST00000487825 SLITRK4Q8IW52 837 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 SLC26A8Q96RN1 970 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 DIRC2Q96SL1 478 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 C19orf44Q9H6X5 657 aa7.34□□□□□ -1.23
BRCA1-217ENST00000487825 CEP350Q5VT06 3117 aa7.34□□□□□ -1.24
BRCA1-217ENST00000487825 ARHGEF5Q12774 1597 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 HPXP02790 462 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 ZGLP1P0C6A0 271 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 SNW1Q13573 536 aaKnown RBP7.33□□□□□ -1.24
BRCA1-217ENST00000487825 PKN1Q16512 942 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 BRINP3Q76B58 766 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 TMC3Q7Z5M5 1100 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 SYTL4Q96C24 671 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-217ENST00000487825 FAM84AQ96KN4 292 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 SLC38A3Q99624 504 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 TRPC5Q9UL62 973 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-217ENST00000487825 CHD4Q14839 1912 aa7.33□□□□□ -1.24
BRCA1-217ENST00000487825 ZNF644Q9H582 1327 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-217ENST00000487825 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 FAM86C2PA6NEL3 165 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 CLEC3AO75596 197 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 NME1P15531 152 aaKnown RBP7.32□□□□□ -1.24
BRCA1-217ENST00000487825 TEKQ02763 1124 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 LRRFIP1Q32MZ4 808 aaKnown RBP7.32□□□□□ -1.24
BRCA1-217ENST00000487825 KCNK12Q9HB15 430 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 DCCP43146 1447 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 UTRNP46939 3433 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
BRCA1-217ENST00000487825 RGPD1P0DJD0 1748 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 GLI3P10071 1580 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 PTCH1Q13635 1447 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 DEFB132Q7Z7B7 95 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 TMEM192Q8IY95 271 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 PDZD8Q8NEN9 1154 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 DHX38Q92620 1227 aaKnown RBP7.31□□□□□ -1.24
BRCA1-217ENST00000487825 RNF34Q969K3 372 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 HDAC8Q9BY41 377 aa7.31□□□□□ -1.24
BRCA1-217ENST00000487825 NSUN3Q9H649 340 aaKnown RBP7.31□□□□□ -1.24
BRCA1-217ENST00000487825 METTL5Q9NRN9 209 aaKnown RBP7.31□□□□□ -1.24
BRCA1-217ENST00000487825 NALCNQ8IZF0 1738 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
BRCA1-217ENST00000487825 FZD5Q13467 585 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 TIGD5Q53EQ6 642 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 OXR1Q8N573 874 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 USHBP1Q8N6Y0 703 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 ENOX1Q8TC92 643 aaKnown RBP7.3□□□□□ -1.24
BRCA1-217ENST00000487825 SYTL5Q8TDW5 730 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-217ENST00000487825 LRRC59Q96AG4 307 aaKnown RBP7.3□□□□□ -1.24
BRCA1-217ENST00000487825 TCTN2Q96GX1 697 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 SLC6A18Q96N87 628 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 RNF32Q9H0A6 362 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 SP110Q9HB58 689 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 EBF1Q9UH73 591 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 MINPP1Q9UNW1 487 aa7.3□□□□□ -1.24
BRCA1-217ENST00000487825 XRN1Q8IZH2 1706 aaKnown RBP7.3□□□□□ -1.24
BRCA1-217ENST00000487825 CAMTA1Q9Y6Y1 1673 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 MST1RQ04912 1400 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 EHBP1L1Q8N3D4 1523 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 MEIS3P2A8K0S8 358 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 PRAMEF1O95521 474 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 ATF3P18847 181 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 RACK1P63244 317 aaKnown RBP7.29□□□□□ -1.24
BRCA1-217ENST00000487825 JAG1P78504 1218 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 TRIM26Q12899 539 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-217ENST00000487825 FBXW10Q5XX13 1052 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 SYDE1Q6ZW31 735 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-217ENST00000487825 DAGLBQ8NCG7 672 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 FERD3LQ96RJ6 166 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 FOXP3Q9BZS1 431 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
BRCA1-217ENST00000487825 PLEKHG1Q9ULL1 1385 aa7.29□□□□□ -1.24
BRCA1-217ENST00000487825 TNS1Q9HBL0 1735 aaKnown RBP7.29□□□□□ -1.24
BRCA1-217ENST00000487825 ZFYVE9O95405 1425 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 TRPM2O94759 1503 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 SSU72P8A0A1W2PR75 194 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 MEIS1O00470 390 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms