RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 SLC4A3P48751 1232 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 GPR142Q7Z601 462 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 RGS22Q8NE09 1264 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 PIBF1Q8WXW3 757 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 TMX3Q96JJ7 454 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 TRIM47Q96LD4 638 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 LLPHQ9BRT6 129 aaKnown RBP15.39■□□□□ 0.05
COL4A6-207ENST00000487645 ACAD9Q9H845 621 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 CWC22Q9HCG8 908 aaKnown RBP15.39■□□□□ 0.05
COL4A6-207ENST00000487645 PRDM10Q9NQV6 1147 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 MRPL11Q9Y3B7 192 aaKnown RBP15.39■□□□□ 0.05
COL4A6-207ENST00000487645 IVNS1ABPQ9Y6Y0 642 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 PLXNA1Q9UIW2 1896 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 ZSWIM8A7E2V4 1837 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 TNPO2O14787 897 aaKnown RBP15.38■□□□□ 0.05
COL4A6-207ENST00000487645 PTPREP23469 700 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 PRMT2P55345 433 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 PFKFB3Q16875 520 aaPredicted RBP15.38■□□□□ 0.05
COL4A6-207ENST00000487645 USH1GQ495M9 461 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 WDR78Q5VTH9 848 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 SAMD3Q8N6K7 520 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
COL4A6-207ENST00000487645 PHKBQ93100 1093 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 ARHGAP39Q9C0H5 1083 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
COL4A6-207ENST00000487645 hCG_1642624A0A1W2PR95 340 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 CTDNEP1O95476 244 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 SCG2P13521 617 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 PKN1Q16512 942 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 MORN1Q5T089 497 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 MCF2L2Q86YR7 1114 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 CLEC4DQ8WXI8 215 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 MMP19Q99542 508 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 HOMER2Q9NSB8 354 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 MAP3K20Q9NYL2 800 aaKnown RBP15.37■□□□□ 0.05
COL4A6-207ENST00000487645 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 ZNF236Q9UL36 1845 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
COL4A6-207ENST00000487645 RBBP6Q7Z6E9 1792 aaKnown RBP15.36■□□□□ 0.05
COL4A6-207ENST00000487645 DEXIO95424 95 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 CAP1Q01518 475 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 GRB14Q14449 540 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 KCTD2Q14681 263 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 TEX2Q8IWB9 1127 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 CCDC83Q8IWF9 413 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
COL4A6-207ENST00000487645 ANKRD35Q8N283 1001 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 NSUN7Q8NE18 718 aaKnown RBP15.36■□□□□ 0.05
COL4A6-207ENST00000487645 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 USP6NLQ92738 828 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 NUDT12Q9BQG2 462 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 BARHL2Q9NY43 387 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 SRRDQ9UH36 339 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 PFASO15067 1338 aa15.36■□□□□ 0.05
COL4A6-207ENST00000487645 GHRHRQ02643 423 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 ST3GAL1Q11201 340 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 MAP2K5Q13163 448 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 HEATR3Q7Z4Q2 680 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 SMARCC2Q8TAQ2 1214 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 WASF1Q92558 559 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 SH3GLB2Q9NR46 395 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 SLC5A4Q9NY91 659 aa15.35■□□□□ 0.05
COL4A6-207ENST00000487645 ORC3Q9UBD5 711 aaPredicted RBP15.35■□□□□ 0.05
COL4A6-207ENST00000487645 DNAJC25-GNG10A0A024R161 153 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 STXBP3O00186 592 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 NFIBO00712 420 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 HOXC6P09630 235 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 XRCC5P13010 732 aaKnown RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 ADORA2AP29274 412 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 RGS2P41220 211 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 HMGN5P82970 282 aaKnown RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 IRF5Q13568 498 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 CUL4AQ13619 759 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 WWC2Q6AWC2 1192 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 CCDC12Q8WUD4 166 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 GLT8D2Q9H1C3 349 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 A1CFQ9NQ94 594 aaKnown RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 DIS3Q9Y2L1 958 aaKnown RBP15.34■□□□□ 0.05
COL4A6-207ENST00000487645 TRIM17Q9Y577 477 aa15.34■□□□□ 0.05
COL4A6-207ENST00000487645 PTPDC1A2A3K4 754 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 OPLAHO14841 1288 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 FDPSP14324 419 aaKnown RBP15.33■□□□□ 0.04
COL4A6-207ENST00000487645 TAL1P17542 331 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-207ENST00000487645 FLT3LGP49771 235 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 HSD17B4P51659 736 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 NAPAP54920 295 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 BAATQ14032 418 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-207ENST00000487645 NSMFQ6X4W1 530 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms